Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq6751 113 5e-20 seq343 111 2e-19 seq113 95.1 1e-14 >seq6751 Length=68926 Score = 113 bits (124), Expect = 5e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | ||| || | ||| | ||| | ||| ||||| || ||||||||||| || Sbjct 5320 TTCCACCACGGAGGCGAAGCACTAAGTGCAACGTTGATTCTTTCTGAATGTTGTAATCCG 5261 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| || | ||| || || ||||| || || || |||| ||| |||||||| || | Sbjct 5260 CAAGCGTTCGTCCGTCTTCTAGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAG 5201 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || || || || || || || ||| | ||||| || || || | Sbjct 5200 GAATTCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATAGTGTCCGATGACTCGA 5141 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || | ||| |||||||| || || | || ||||| |||||||||||| Sbjct 5140 CTTCCAAAGTTATGGTTTTCCCAGTCAGCGTCTTAACAAAAATTTGCATT 5091 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || ||||| || || || ||||||||||| || ||| ||| | ||| || Sbjct 5756 ACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGCGTGCGTCCGTCTTCC 5697 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || ||||| || |||||||| | ||| ||||| || || || || |||||||| || || Sbjct 5696 AGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTGG 5637 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | || || || |||||||| || | ||||| ||||| Sbjct 5636 ATCTTCGCCTTCACATTGTCGATAGTATCTGAAGATTCCACTTCCAACGTAATAGTTTTC 5577 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || | || ||||| |||||||||||| Sbjct 5576 CCAGTCAGCGTCTTAACAAAAATTTGCATT 5547 >seq343 Length=30199 Score = 111 bits (122), Expect = 2e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 134526 TTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATC 134585 ||||| |||||||| || | | || | ||| || | ||||| ||||| |||||| Sbjct 12615 TTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAATC 12674 Query 134586 AAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCC 134645 |||||||| || ||||| || || ||||| || |||||||| || || || || Sbjct 12675 AAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTATCG 12734 Query 134646 AATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 | |||||||| ||||| || || ||||| || ||||| ||||| | || || |||||| Sbjct 12735 ATGGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTCTTGACGAAA 12794 Query 134706 ATTTGCATT 134714 || |||||| Sbjct 12795 ATCTGCATT 12803 >seq113 Length=12257 Score = 95.1 bits (104), Expect = 1e-14 Identities = 459/717 (64%), Gaps = 31/717 (4%) Strand=Plus/Plus Query 8233 GCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGC 8292 |||||| | || |||| | || ||||| | |||||| ||||| |||||||||||||| Sbjct 4802 GCCATTTTGGATAGTCAGATTGAGACCGGAACGCCGTATATGCTTTACAAAGACGCTTGT 4861 Query 8293 AACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAA 8352 || ||| |||||| || | || |||||| | | |||||||| ||| |||| Sbjct 4862 AATCGTAAATCCAATCAGCAGAATCTTGGAACCATTCGATCAAGCAATCTCTGCTGTGAA 4921 Query 8353 ATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTG----TG 8408 || | ||||| | || | |||||||| || |||||| | || || | || Sbjct 4922 ATCATCGAGTACTCAGACTCCAAAGAAGTGGCAGTATGCAATTTGGCTTCCATCGCATTG 4981 Query 8409 TTTAAACGCGTTCGTTGATCGACGCTCAAACACTTACGACTTTGAACAATTGAAAAACGC 8468 | ||| || || ||| ||| | || | | |||| | |||| | ||| Sbjct 4982 TCAAAA----TTTGTGTATCAG-----AAAGAATTTC-AGTTTGCAAAATT---ATACGA 5028 Query 8469 CGTG-CAAGTGACGGTACGCAA--TTTAGATCGCATCATTGATGTCAATTTTTATCCCTT 8525 | ||| || |||| || | | | ||||||||| |||||| |||||| | Sbjct 5029 AATCACAAAAATCGTTACGAAAAATCTCAACAAAATCATTGATCTCAATTATTATCCGAT 5088 Query 8526 GGAAGAAGCGCGCGT-ATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTC 8584 ||||| | || | | | || ||| || |||| |||| | ||||| ||||||| Sbjct 5089 TCCTGAAGCACAAGTGAGCAATCA-GCGACATCGACCGATTGGAATCGGCGTTCAAGGTC 5147 Query 8585 TGGCCGACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCA 8644 | ||||| ||||| || || | || || | |||||| ||| || ||| ||||| Sbjct 5148 TTGCCGATACGTTTTTACTGATGAGTCTTCCATTTGAAAGCAAAGCTGCTCGCGAGCTCA 5207 Query 8645 ACATAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCC 8704 ||| | |||| |||||| |||||| || || | ||||| | || | || | Sbjct 5208 ACAAAGAAATTTTTGAAACGATGTATTTCGCGGCGATGGAAGCTTCCATGGAATTGGCAC 5267 Query 8705 GAGAATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAAT 8764 | ||| | || ||||||| || || || || | || || || || || |||| Sbjct 5268 GGGAACTCGGACCGTACGAGAGCTATGCTGGATCACCAGTTAGTCGAGGTATCTTTCAAT 5327 Query 8765 ACGACATGTGGAATGTCACGCCCACCTCT--TTG-TGGAATTGGAGCGATTTGAAAC-GC 8820 || |||||| | |||| ||| || | | ||| |||||| | |||||| || Sbjct 5328 TTGATATGTGGCAGGTCATTCCCGATTCCGGTCGATGGGATTGGAAGCAGTTGAAAGAGC 5387 Query 8821 AA--AATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCA 8878 || | | |||| ||| | || || || || || | ||| ||||| |||||| Sbjct 5388 AAGTAGCTACTCA---CGGAATCCGAAACTCTTTGCTGCTCGCTCCGATGCCAACCGCCT 5444 Query 8879 CGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGT 8935 | || |||||||| | || || ||| || | ||||||||||| |||| ||| Sbjct 5445 CAACGGCTCAAATTCTCGGCAATTGCGAGTCTATCGAGCCGTTCACTTCCAACATGT 5501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505323038781080