Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq6751 114 1e-20 >seq6751 Length=68926 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTC 27097 ||||| || ||||| || ||||| || || ||||| || | || | | || ||||||| Sbjct 5528 ACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATC-CGCAAGCGTTCGTCCGTCTTC 5470 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 || |||||||||||| | || ||||| || ||||| || || | || || || || Sbjct 5469 TAGTTGTTTACCGGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTGTCCTG 5410 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| |||| | | || | |||||||| | || ||||| | |||||||| ||| Sbjct 5409 GATCTTCGCCTTCACGTTGTCAATAGTGTCTGATGACTCTACTTCCAAAGTTATAGTTTT 5350 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||| ||||||||||| || ||||| Sbjct 5349 TCCAGTCAAGGTTTTCACAAATATCTGCAT 5320 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTT 27096 ||||| ||| | |||||| ||||| ||||| ||||| || | || | |||| |||||| Sbjct 5757 TACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATC-CGCAAGCGTGCGTCCGTCTT 5699 Query 27097 CGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGG 27156 | || ||||||||||| |||| ||||| || || || || || | || ||||| || Sbjct 5698 CCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCT 5639 Query 27157 CGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATT 27216 |||||| |||| | || | ||| |||| | ||| ||||| | || |||| || Sbjct 5638 GGATCTTCGCCTTCACATTGTCGATAGTATCTGAAGATTCCACTTCCAACGTAATAGTTT 5579 Query 27217 TGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || ||||| || || ||||| |||||||| Sbjct 5578 TCCCAGTCAGCGTCTTAACAAAAATTTGCAT 5548 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/226 (69%), Gaps = 3/226 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTC 27097 || || || ||||| || ||||| || || ||||| || | || | | || ||||||| Sbjct 5072 ACTAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATC-CGCAAGAGTACGTCCGTCTTC 5014 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 || ||||| || ||| | || ||||| || ||||| || || | || ||||| || Sbjct 5013 TAGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCTTTGTCTTG 4954 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| || | | || | ||||||| | |||||||| | ||| || | || Sbjct 4953 AATCTTGGCCTTTACATTATCGATCGTGTCTGAAGACTCAACTTCCAAAGTGATGGTCTT 4894 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCTAAAAATTTA 27263 || || || ||||||||||| || ||||| | || | ||||||| Sbjct 4893 TCCAGTAAGCGTTTTCACAAAAATCTGCAT-GGTGATTCAAATTTA 4849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424872621045048