Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3366 105 8e-18 seq113 95.1 1e-14 >seq3366 Length=157547 Score = 105 bits (116), Expect = 8e-18 Identities = 187/270 (69%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 130028 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 130087 || || || || ||||| |||||| ||||| || ||||| || || ||||| | || Sbjct 39270 TGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAATCCT 39329 Query 130088 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 130147 || ||||||| ||| || || | || ||||| || ||||| ||||| || || || | Sbjct 39330 CGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTCGACGGCC 39389 Query 130148 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCC 130207 || || || | | | || ||||| ||| |||||| ||| |||| |||| |||| Sbjct 39390 GCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCACCATTTCAACGCC 39449 Query 130208 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAG-AGTTCCTTCTT 130266 || || || || || | ||||||| || | ||||| || || | | || || Sbjct 39450 CATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCG-CATAGTAAATGCTGTTT 39508 Query 130267 TTCTGATGGATCTTTGATGTACTTATCTAT 130296 ||| | ||||||||||||||| |||| || Sbjct 39509 TTCGGTTGGATCTTTGATGTATGTATCAAT 39538 >seq113 Length=12257 Score = 95.1 bits (104), Expect = 1e-14 Identities = 312/481 (65%), Gaps = 7/481 (1%) Strand=Plus/Minus Query 119028 TCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAG 119087 || || || || ||||| || || || |||||||| || || | || | ||| || Sbjct 4659 TCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAATAAATCTCGTGCT 4600 Query 119088 CGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGC 119147 ||| ||||| || ||||| ||| | |||| ||| || | ||||||||| ||| Sbjct 4599 CGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATATCCGCATGC 4540 Query 119148 CACGGTTCCAGGTACACCGCGATTGACCCCTTACGA---CGACCAGCCTGGTTTACATAC 119204 || || || || || | || | ||||| || || | |||| | || | || || Sbjct 4539 CAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCACCTTGATCAACGTAT 4480 Query 119205 CTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTC 119264 | || ||| | || || || ||||||||||||| || |||| || ||||| ||| Sbjct 4479 CGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTTCCATTCGTC 4420 Query 119265 CCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGC--ATACCAATACCCCCTG 119322 || |||||| | || ||| | || || |||| | | | |||||||| || | Sbjct 4419 CCGCGAATATAACTGTTGGTGGAGC-GA-ATATTGGAAATACTGACGCCAATACCGCCAG 4362 Query 119323 CCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCAC 119382 |||||||||| || ||| || | | || || |||| || || ||||| || ||| Sbjct 4361 CCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCAT 4302 Query 119383 CCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGA 119442 | | | | | || || || ||| | ||| || | || || || || ||||| | Sbjct 4301 CTTGCATGGATAATAGAAAACACGACGATAATTGGGGTCGAGGCGTTCCCGCATTGAAAA 4242 Query 119443 GAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGG 119502 | || || || || || | || | ||| ||||| | || || || ||||| |||| Sbjct 4241 GCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCCAAAACGG 4182 Query 119503 C 119503 | Sbjct 4181 C 4181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618342983581240