Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq113 156 5e-33 >seq113 Length=12257 Score = 156 bits (172), Expect = 5e-33 Identities = 634/985 (64%), Gaps = 47/985 (5%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 |||||| | ||| | ||||| ||||| |||| || || || | | ||| | || Sbjct 4126 CCCACAACATATGATAATGCGAGTGGCTGTCGGCATACACAAAGAGAATTTGGATGCCGT 4185 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATT---CACGCAACACCAACCCT 104337 ||||| || || || | ||||| ||| | |||| || || ||||| || || || Sbjct 4186 TTTGGAAACGTATGAACACATGTCACAA---AAGTTCTTTACGCATGCAACTCCGACGCT 4242 Query 104338 CTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGA 104397 |||||||| || || || |||||||| | || || || || | ||| | || Sbjct 4243 TTTCAATGCGGGAACGCCTCGACCCCAATTATCGTCGTGTTTTCTATTATCCATGCAAGA 4302 Query 104398 GGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGC 104457 || || ||| |||| || || | || || | | |||||| || ||||||||||| Sbjct 4303 TGATTCTATCGACGGCATTTACGACACGCTGAAACAATGTGCGTGTATTTCAAAGTGGGC 4362 Query 104458 TGGGGGTATTGGGAT--GCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 104515 ||| |||||||| | | | |||| || | | ||| || | |||||| ||| Sbjct 4363 TGGCGGTATTGGCGTCAGTATTTCCA--ATATTCGCTCCACCAACAGTTATATTCGCGGG 4420 Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575 || ||||| || |||| ||| ||||||||||||| || || || | |||||| || Sbjct 4421 ACGAATGGAAGTTCGAATGGAATTGTTCCAATGCTTCGGGTGTTCAATGACACAGCTCGA 4480 Query 104576 TATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCA 104629 || || |||||| ||| ||| ||||||| ||| | ||| | ||||| ||||| Sbjct 4481 TACGTTGATCAAGGTGGTGGGAAGCG--GAAAGGG-TCTTTTGCAATTTATCTAGAGCCC 4537 Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCG 104689 ||||| ||||||||| | ||||| || || | ||| || || || | || Sbjct 4538 TGGCATGCGGATATCTTTGAGTTTCTGGAACTACGTAAGAATCATGGAAATGAACTCCAT 4597 Query 104690 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749 || || ||| | || | ||||| ||||| || ||||| || ||||| | || || Sbjct 4598 CGAGCACGAGATTTATTTTATGCTCTTTGGATCCCCGATCTGTTTATGAAACGTGTGGAA 4657 Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809 || | | ||| | | || ||||| || |||| || | || | || | | || Sbjct 4658 GACAACCAAGAATGGAGTTTATTCTGTCCGAACGAGGCTCCACGACTTTATGA-GACATG 4716 Query 104810 GGTGAG-GAGTTTGAAGCCCTTTACACAAAGTACGAG--GAAGAAGGTCGGGCGACTGCG 104866 || || || ||||| || | || |||||||||| | || | | ||| | Sbjct 4717 GGGAAGCGAATTTGATGCGTTATATGAAAAGTACGAGTCTCAAAACATTGCCCGA--AAG 4774 Query 104867 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926 || || ||| | ||||| || ||| | | ||| | ||||| || || Sbjct 4775 ACTGTCAAAGCCCAGCAATTGTGGTTTGCCATTTTGGATAGTCAGATTGAGACCGGAACG 4834 Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAAT-TTGG---- 104981 || || ||||||||||||||||| ||||| | || ||||| ||||| |||| Sbjct 4835 CCGTATATGCTTTACAAAGACGCTTGTAATCGTAAATCCAATCAGCAGAATCTTGGAACC 4894 Query 104982 GTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGA---CAAAGATG 105038 | ||||||| ||||||||| |||||| | || | |||| |||||| | Sbjct 4895 ATTCGATCAAG-----CAATCTCTGCTGTGAAATCATCGAGTACTCAGACTCCAAAGAAG 4949 Query 105039 AGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAA 105098 ||| || || || | || || ||||| | | || | |||| ||| | || Sbjct 4950 ---TGGCAGTATGCAATTTGGCTTCCATCGCATTGTCAAAATTTGTGTATC-----AGAA 5001 Query 105099 AGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACA 105158 ||| |||| | | || |||| | ||||| | || |||| || || ||||| || |||| Sbjct 5002 AGA-ATTTCAGTTTGCAAAATTATACGAAATCACAAAAATCGTTACGAAAAATCTCAACA 5060 Query 105159 GAGTTATTGATAGAAATTTTTACCC 105183 | | |||||| |||| ||| || Sbjct 5061 AAATCATTGATCTCAATTATTATCC 5085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583173828523960