Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq8393 82.4 9e-11 seq7313 82.4 9e-11 >seq8393 Length=255 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 139398 GTTTATGTCAAATGAGCCATTCAATTCTGGGTCGTTAATGAAACCTTTCCAACCTACAGT 139457 ||| |||| |||| || || || ||||| ||||| || | |||||||| || || || Sbjct 5 GTTGATGTTGAATGTTCCGTTTAAGTCTGGATCGTTGATAAGTCCTTTCCACCCGACTGT 64 Query 139458 TGTTCTTGGTTTCTCAAAATAAACACGCAT 139487 |||||||| |||||||||||||||||||| Sbjct 65 CGTTCTTGGCTTCTCAAAATAAACACGCAT 94 >seq7313 Length=18434 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 139398 GTTTATGTCAAATGAGCCATTCAATTCTGGGTCGTTAATGAAACCTTTCCAACCTACAGT 139457 ||| |||| |||| || || || ||||| ||||| || | |||||||| || || || Sbjct 16094 GTTGATGTTGAATGTTCCGTTTAAGTCTGGATCGTTGATAAGTCCTTTCCACCCGACTGT 16153 Query 139458 TGTTCTTGGTTTCTCAAAATAAACACGCAT 139487 |||||||| |||||||||||||||||||| Sbjct 16154 CGTTCTTGGCTTCTCAAAATAAACACGCAT 16183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568244854952520