Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq113 338 9e-88 seq3366 246 4e-60 >seq113 Length=12257 Score = 338 bits (374), Expect = 9e-88 Identities = 1444/2254 (64%), Gaps = 56/2254 (2%) Strand=Plus/Minus Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870 ||| || |||| |||||| || || || ||||| ||||| ||||||||||||| Sbjct 5851 TGTTCGGAGATGGTACATTCCTGTCTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGA 5792 Query 76871 TGTCAGTTTGGAATAAC--TAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCG 76928 || ||||| | | || | || ||||| || |||||||| | || ||||| ||| Sbjct 5791 AGTGAGTTT--ACTGACAGTCGGGTCGGCAATGTGAATATTTAGTGATTGACTCTGACAA 5734 Query 76929 ATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATA 76988 ||| | ||||||| ||| || ||||| | | ||| | |||||| |||||||||| Sbjct 5733 ATGTACGCTCCTCGATCGGCAGCCATGTCCAAAATCGCCTTTTGCTTGATTTCCCAAACT 5674 Query 76989 GTTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCA 77045 |||||| | || ||| | || | |||| | | ||||||| | |||||| | | Sbjct 5673 GTTTTGTACTTTTCTTTCACATGAGAAGGAATTTCAGCGATATTTTGTACGGAACCGCGA 5614 Query 77046 TCTGATATAATTGTATTCTTTATATCATCAT-TCCACAATTTCCTCTCTGTTAAAACTCT 77104 || | ||| |||| | || | || ||||||| ||| |||| | || |||| Sbjct 5613 TCGCGAAGGATTTGATTCCGAACGTC-TGATGTCCACAAATTCATCTCAAT--AAGCTCT 5557 Query 77105 A--AGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATA 77162 | ||||| || || ||| ||||||||||| | || | ||| || | || Sbjct 5556 TCCATGAGATATTTGTTGACAATTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATG 5497 Query 77163 TTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTT 77222 || || | || || | ||| || || || | ||||||||| || || || ||| Sbjct 5496 TTGGAAGTGAACGGCTCGATAGACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTT 5437 Query 77223 GGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGA 77282 ||||| || || | || ||| |||| || || || || | || ||||| | Sbjct 5436 GGCATCGGAGCGAGCAGCAAAGAGTTTCGGATTCCGTGAGTAGCTACTTGCTCTTTCAAC 5377 Query 77283 TATTTCCAATCCCAAAGATCTGAA---GGTACAACATCCCAAAGATCGTATTGTAGAATT 77339 | ||||||||||| || | ||| || | || | ||| | ||| |||| | || Sbjct 5376 TGCTTCCAATCCCATCGACCGGAATCGGGAATGACCTGCCACATATCAAATTGAAAGATA 5317 Query 77340 CCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAG--CTAGTT 77397 || |||| | ||||||| ||| | || || ||||| ||| | | | | || Sbjct 5316 CCTCGACTAACTGGTGATCCAGCATAGCTCTCGTACGGTCCGA--GTTCCCGTGCCAATT 5259 Query 77398 CACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTT 77457 | ||||||| || || |||| || ||||| ||||| | || ||||| || Sbjct 5258 CCATGGAAGCTTCCATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGC 5199 Query 77458 GTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAA 77517 | || | | || ||||| ||| | | || | ||| | ||| || | || |||| Sbjct 5198 GAGCAGCTTTGCTTTCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGAA 5139 Query 77518 CTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAAT 77577 | || || ||||| |||| ||||| || |||| | || ||||| ||||| ||||||| Sbjct 5138 CGCCGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGCTTCAGGAATCGGATAAT 5079 Query 77578 AATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTT 77637 |||| | || || ||||| ||||||||| | ||| | ||| | || | || || Sbjct 5078 AATTGAGATCAATGATTTTGTTGAGATTTTTCGTAACGATTTTTGTGATTTCGTATAATT 5019 Query 77638 TAAGAAAATCAAATCTTCCATCTATAACAAACATGTT--CAAAGCTATAGATGCTAGATT 77695 | ||| | |||| || ||| ||| | || || ||| || || || || | ||| Sbjct 5018 TTGCAAACTGAAAT--TCTTTCTGATACACAAATTTTGACAATGCGATGGAAGCCAAATT 4961 Query 77696 ACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACA 77755 || ||||| || || || | || | || | || || || || ||||| || | Sbjct 4960 GCATACTGCCACTTCTTTGGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTGCTTGA 4901 Query 77756 TTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAAT 77815 | || || || ||||| || || ||| || ||| || | ||| || ||||| || Sbjct 4900 TCGAATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAAAGCAT 4841 Query 77816 AAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTT 77875 | |||| || ||||| |||||||| || | ||| | || || || | ||| Sbjct 4840 ATACGGCGTTCCGGTCTCAATCTGACTATCCAAAATGG-----CAAACCACAATTGCTGG 4786 Query 77876 --TATCATAGATTTGTATCGC-CTCTCTCTT-----TCATATTGAGTATATAGCCGTTCA 77927 | | | || || ||| | | | || || || | ||||| | ||| Sbjct 4785 GCTTTGACAGTCTT---TCGGGCAATGTTTTGAGACTCGTACTTTTCATATAACGCATCA 4729 Query 77928 AATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAG 77987 ||||| |||||| |||| | || || || || || || | || ||| Sbjct 4728 AATTCGCTTCCCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCAT 4669 Query 77988 TCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGA 78047 || | || | || ||||||||||| ||||| || ||||| |||||| ||||| | Sbjct 4668 TCTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAATAAA 4609 Query 78048 TCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATA 78107 ||||| | || ||| ||||||||| |||||| || || |||||||| | ||| Sbjct 4608 TCTCGTGCTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATA 4549 Query 78108 TCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGA 78167 || | |||||| || |||||||| ||||| | | || || || ||| || ||| Sbjct 4548 TCCGCATGCCAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCACCTTGA 4489 Query 78168 TCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTT 78227 || | |||| || |||| ||| | || | | |||||||| ||| || || || || Sbjct 4488 TCAACGTATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTT 4429 Query 78228 CCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATT 78287 ||||| || || ||||||||| | | ||||||||| ||| | || || Sbjct 4428 CCATTCGTCCCGCGAATATAACTGTTGGTGGAGCGAATATTGGAAATACTGACGCCAATA 4369 Query 78288 CCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATA 78347 || || ||| ||| || || || || |||||| || ||||| || || || ||| Sbjct 4368 CCGCCAGCCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATA 4309 Query 78348 CTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 78407 ||||| |||| | |||||||| || | ||| | || ||||| ||| Sbjct 4308 GAATCATCTTGCATGGATAATAGAAAACACGACGATAATTGGGGTCGAGGCGTTCCCGCA 4249 Query 78408 TTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 78467 || || | ||||||| |||||||||||| | |||| || | | | || ||||| Sbjct 4248 TTGAAAAGCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCC 4189 Query 78468 ATAGCTG-ATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTG 78526 | | | | || | | || | ||| || || || || || || ||||| | |||||| || Sbjct 4188 AAAACGGCATCCAAATTCTCTTTG-TGTATGCCGACAGCCACTCGCATTATCATATGTTG 4130 Query 78527 AGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAA 78586 || | |||| | || ||| | ||||| || ||||| |||| ||||||||| Sbjct 4129 TGGGCGTTCACACACTTTTCCATTCACACGCAACAGATACGATTTCTCCAGAGTTTTAAA 4070 Query 78587 ACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTT 78646 |||||||||| ||| ||||||||| || ||||| | ||||| || ||||| Sbjct 4069 GCCAAAATAGTCGTAATCAAAGTCTCTATCACCGATAATGGCGGAATTGAGAGCTTCTTT 4010 Query 78647 GTATTTGGTAACAATATCCATG-ACAGTAGTTG--AAATAATAGGAGATCGTACACCATT 78703 || | ||||||| || ||| ||| | |||| | |||| |||| |||| | Sbjct 4009 GTTCTCCATAACAAT-TCGATGCACA-TCGTTGGCGATTAAT-GGAGCGGGTACTTTGGT 3953 Query 78704 --TTTAG-GATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGT 78760 ||| | | ||| | || |||||| || || ||||| || | ||| ||||| Sbjct 3952 GGTTTCGTGCTTATTTTCGTAAAATAA---TTGAATGTTTTCACTGAAGACTTTGTTTGT 3896 Query 78761 TTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTG 78820 | || |||| ||| || | ||| |||| ||||| | | | |||| |||||||| Sbjct 3895 ATTTTTATGTAAATTGGAAATAGCAATTCGAGCAGCCAATTTGGAGAAATCGGGATGTTG 3836 Query 78821 TGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCC 78880 ||| | || ||||| ||||||| || || || || || || ||||| || Sbjct 3835 TGTGCTGCAGTAAGCTGCGGTTTCTGCTGCCAATTCGTCCAATTCCGATGTGGTGACGCC 3776 Query 78881 ATTATATAGTCCTTGAATAACTTTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTT 78940 ||| | || ||| |||||| | |||| ||| ||||| || | || ||||| Sbjct 3775 CGGATACACGCCAGCAATCACTTTCTGAGATATTTGGACGGGATCAACGTATTCTGTGTT 3716 Query 78941 CAATCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAATATAACATTCTCCTT 79000 || || || | |||| | || || | |||||||| || ||| | || || || Sbjct 3715 TAAGTTGTAGCAGAGTTTTGTGATTCGCGCAGTGATTTTGTCGAATTTGACGACTTCTTT 3656 Query 79001 GCATCCATTTCGTTTAATAACGAACATCGTTTGG 79034 | ||| | ||||| || || |||| ||||| Sbjct 3655 TCGTCCGTCACGTTTGATGACATACAT--TTTGG 3624 >seq3366 Length=157547 Score = 246 bits (272), Expect = 4e-60 Identities = 613/910 (67%), Gaps = 23/910 (3%) Strand=Plus/Plus Query 47855 ATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCAT 47914 |||||| || || |||||||| ||||| || ||||| |||| || || || | ||||| Sbjct 38969 ATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATATCCAT 39028 Query 47915 AAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTC-TGAAATCAGTC 47973 | ||||| |||||| || | ||| | || | | || | | | || || || || Sbjct 39029 CCAGTCAAAGGGATTAGAAGCGTGATATAACTTGCTGACGCCAAGTGCATGTAA-CAATC 39087 Query 47974 TATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAA 48033 ||| || || || || || ||| ||||| |||||||||| || || | | Sbjct 39088 GATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGA 39147 Query 48034 CTGGTAGAGCCTC-CGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCG-A 48091 |||| || | || |||| ||| ||||||||||| | || || || || || | | Sbjct 39148 CTGGAAGTGAATCTCGTAC-AAATTCTTGTTCGATGATAACGGCGTCGGAAATGATTGCA 39206 Query 48092 TGT-TACCGTTTCCTCACTTGGTGGATACA-ACAAATGTTTAA-ACATTAAACATGCAAA 48148 || || | ||| || | | || || | | | | |||| | ||||||||| Sbjct 39207 TGAATAGAG---CCTT-CTGGAAGCTTATTTACCAGTTTCGAGTACATCAGACATGCAAA 39262 Query 48149 ATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCAT 48208 |||||||| || |||||||| | ||| || | || || ||||| || || ||||| Sbjct 39263 GTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCAT 39322 Query 48209 TAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 48268 | ||| ||||| || ||||||||||| | ||| ||||| || || || || ||||| Sbjct 39323 CAATCCTCGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTC 39382 Query 48269 TACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTATC-CACCGTT 48327 ||||||||||| || | ||| ||| | | ||| | || || ||| |||| || Sbjct 39383 GACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTT-TGGATCGCACCATT 39441 Query 48328 ---GTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAA 48384 ||||| | || || || | || || || |||||||| || || | || || Sbjct 39442 TCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGC-GCATAGTAAA 39500 Query 48385 AG-tttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAG 48443 | | |||||| | |||||| | ||| ||||| || || | ||||| ||| ||| Sbjct 39501 TGCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAG 39560 Query 48444 TGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACC 48503 || |||||||| ||||| || || ||||| ||||| |||| ||||| | ||| || ||| Sbjct 39561 TGTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGCTTCCGGGATTTGAACC 39620 Query 48504 TCCGTAC--AAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAA 48561 || | | ||| || | || | ||| ||||| || || |||||||| || ||||| | Sbjct 39621 TCACTGCTGAAATTCAT--GGCGAGATTTTCATTAACAATCCCATCACTGGCTGCAAAGA 39678 Query 48562 ATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGA 48621 | || || || ||||| ||||| | | | || ||| | | ||| ||||||||| | Sbjct 39679 AGGCCAACACGTGTTTGATAAAGTGTCTCTCATTGTCCGATATATTAAGCCAGTCATTCA 39738 Query 48622 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACA 48681 | || | | ||| | |||||| || |||||||| |||||||||||| ||||||| Sbjct 39739 TGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTTATACA 39798 Query 48682 TATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTGGATTTTTTGCAA 48741 | | ||| || ||| | ||| || || || | ||||| | || ||||||| | | Sbjct 39799 TGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGGTTCGGATTTTCTCGGA 39858 Query 48742 GGATAGGTTC 48751 | | |||||| Sbjct 39859 GAAAAGGTTC 39868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694565216198560