Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq3366 269 3e-67 >seq3366 Length=157547 Score = 269 bits (298), Expect = 3e-67 Identities = 634/939 (68%), Gaps = 26/939 (3%) Strand=Plus/Plus Query 23160 TTAAAAATCTTCATCTAAAGTGAATT-TCACTGCTTTATCACTATTCAT-AACACCCATT 23217 ||| |||||| ||||||||||||| | || |||| || | || |||||| | Sbjct 38906 TTAGAAATCTGCATCTAAAGTGAAAACTTGCTCCTTTG-CAG-AGACACCAACACCAGAT 38963 Query 23218 TTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTT 23277 || |||||| ||||| ||| | || ||||| ||||| || || | | || || | Sbjct 38964 TTCGCATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATA 39023 Query 23278 TCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAATTCCTT-TAA 23336 ||||| | ||||| |||||||||| | ||||| | | | | || | | | ||| Sbjct 39024 TCCATCCAGTCAAAGGGATTAGAAGCGTGATATA-ACTTGCTGACGCCAAGTGCATGTAA 39082 Query 23337 AAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAG 23396 | | ||| || ||||| || || ||||||| ||||||| | || || || ||||| Sbjct 39083 CAATCGATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAG 39142 Query 23397 TTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTAT 23456 | ||||||| | ||| || ||| || ||| ||| ||| || || ||| || Sbjct 39143 CTCGACTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAATGAT 39202 Query 23457 TTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAA--ACAATAAACATGCA 23514 | | |||| |||| | | | ||||| | | | ||| | ||||||| Sbjct 39203 TGCATGAATAGAGCCTTC--TGGAAGCTTATTTACCAGTTTCGAGTACATCAGACATGCA 39260 Query 23515 AAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGC 23574 || ||||||||||| |||||||| | ||| || | ||||| ||||| | ||| ||| Sbjct 39261 AAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGC 39320 Query 23575 ATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCA-AATGATCCGGAAAAGAAAATACC 23633 || ||||||||||| || | ||||||||| | |||| ||||||||||| || || || || Sbjct 39321 ATCAATCCTCGTTTCTTCAGCCAAAATATAG-AGCAGAATGATCCGGAGAAAAAGATTCC 39379 Query 23634 CTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATA---ATCAGAAAT 23690 || || ||||||||||| || | | | |||| | |||| | ||| | Sbjct 39380 TTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCA--- 39436 Query 23691 CCAtttttttGTCCAATTAGCCTTCAATT--TTACACACTCAATTGTTTCAATTGCTTTT 23748 |||||| | ||| | || || ||| | || ||| ||||||||||| || | Sbjct 39437 CCATTTCAACGCCCATTGTGCTTT--ATTGGTAACGCACGGGATTGTTTCAATCGCGCAT 39494 Query 23749 AAGAGAAAAGTTTTTTCTTCATT--ATCTGTTATATATGTATCAATTAGTAAACTATACA 23806 | | || | | ||| | || |||| | || ||||||||||| | ||| ||||| Sbjct 39495 AGTA--AATGCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACA 39552 Query 23807 TTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACA 23866 ||| || || |||||||| || ||||| || || |||||||| |||| |||||| | | Sbjct 39553 CTTCCGAGTGTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGCTTCCGGGA 39612 Query 23867 ATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAG 23926 |||||| ||| | || | | || | |||||| |||||||| |||||||| || | Sbjct 39613 TTTGAACCTCACTGCTGAAATTCATGGCGAGATTTTCATTAACAATCCCATCACTGGCTG 39672 Query 23927 CAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAAT 23986 ||||||| || | || | ||| ||||| ||||| |||| |||| || ||| | Sbjct 39673 CAAAGAAGGCCAACACGTGTTTGATAAAGTGTCTCTCATTGTCCGATATATTAAGCCAGT 39732 Query 23987 CATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCT 24046 |||| || || | ||||| | ||| || | |||||||| |||||| || || Sbjct 39733 CATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCT 39792 Query 24047 TATACATTAGCCAAATATCATTATGTTGTATTGGAAATA 24085 ||||||| |||||| ||| |||||||| ||||||| Sbjct 39793 TATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATA 39831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521410239620600