Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq7469 116 8e-21 seq726 104 5e-17 seq7888 102 2e-16 >seq7469 Length=86738 Score = 116 bits (128), Expect = 8e-21 Identities = 129/172 (75%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 319854 AGAGGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGC 319913 ||| || || ||||| || |||||||| | || || | |||||| ||||||||||| Sbjct 62167 AGACGGAAATCCTTCCAGTTGGCCGTTAGCGATGGCTCTCATCAGCGTTGATTTACCGCA 62108 Query 319914 CCCGTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTT 319973 || ||||| ||||| ||||| || || | ||| | |||| ||||| | |||||| Sbjct 62107 TCCATTTGGACCACAGAGACCATAACGATGTCCTCTCTTCAAACGCAACCGGGCGTTGTT 62048 Query 319974 CAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCC 320025 ||| ||||| | |||||||| |||| ||| || ||||||| ||| |||||| Sbjct 62047 CAGTAGAATCATACCACCATACGCCAAAGAGAACTCACAATTACATAGATCC 61996 >seq726 Length=155756 Score = 104 bits (114), Expect = 5e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||| |||||||||||| |||||||||| ||||| ||||||| ||||||| |||||||| Sbjct 83 TTGCCTGTCTAGCTCAGTTGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGAGGGTTCGA 142 Query 165768 GCCCCACGATGGGCA 165782 |||||||| |||||| Sbjct 143 GCCCCACGGTGGGCA 157 >seq7888 Length=285 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||| |||||||||||| |||||||||| ||||| ||||||| ||||||| ||||||||| Sbjct 46 TGCCTGTCTAGCTCAGTTGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGAGGGTTCGAG 105 Query 165769 CCCCACGATGGGCA 165782 ||||||| |||||| Sbjct 106 CCCCACGGTGGGCA 119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057658513352300