Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq835 242 4e-59 >seq835 Length=76541 Score = 242 bits (268), Expect = 4e-59 Identities = 585/873 (67%), Gaps = 22/873 (3%) Strand=Plus/Plus Query 16679 TAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATG 16738 || || | ||||||||| || |||||||| ||||| || | |||||||| | ||||| Sbjct 29506 TATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGATATCATATCCATC 29565 Query 16739 AAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTA 16798 | ||||| ||||||| |||| | ||| || | || ||| | | |||| | Sbjct 29566 CAGTCAAAGGGATTAGAAGCTTGATATAACTTGCTGACGCCAAGTGCATGTAACAATCGA 29625 Query 16799 TCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACC 16858 ||||| ||||| || || ||||| | ||| || | |||||||| || || || Sbjct 29626 TCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGACT 29685 Query 16859 GGAAGAGCTTC-CGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 ||||| | || ||| ||| || ||| || || | ||| || || ||| || | Sbjct 29686 GGAAGTGAATCTCGTACAAATTC-TTGTTCGATGATAACGGCGTCGGAAATGATTGCATG 29744 Query 16918 AACTCGTTCCTC--GGACGGTGTATGTTTAAGATGTTTAA--ACATCAGACATGCGAAAT 16973 || | | ||| ||| | | | |||| | || | ||||||||||||| || | Sbjct 29745 AA-TAGAGCCTTCTGGAAGCT---TATTTACCAGTTTCGAGTACATCAGACATGCAAAGT 29800 Query 16974 CGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCT 17033 | ||||||| ||| || || | ||||| || || || ||||| | || |||||| Sbjct 29801 CACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCA 29860 Query 17034 TTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGA 17093 |||||||||||| | ||||||||| | | ||| || || || || || || || |||| Sbjct 29861 ATCCTCGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTCGA 29920 Query 17094 CGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGT-CTTTGTTACGAATCCATTTC 17152 ||| ||||| || | | || ||| || ||| || | ||||| || | ||||||| Sbjct 29921 CGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCA-CCATTTC 29979 Query 17153 TGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTC 17212 | |||| | ||||| | | | ||| || ||||| || || | ||| | | Sbjct 29980 AACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCACAGTAAATGC 30039 Query 17213 TCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGT 17272 | |||||| | | || | || || ||||| || | || |||| ||| |||||| Sbjct 30040 TGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGTGT 30099 Query 17273 ATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 || || || || || || |||||||||||||||||||| ||||| | || ||||| || Sbjct 30100 ATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGAACCTCA 30159 Query 17333 ACGTAGAA--TCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACG 17390 | ||| || | || |||||||| || || || || || || || || || || | Sbjct 30160 CTGCTGAAATTCAT--GGCGAGATTTTCATTGACAATTCCATCACTGGCTGCAAAGAAGG 30217 Query 17391 CCAATATATGCTTAATGAAATATTTTTC---GTCCGGTGTAAGAACGCGCCAGTCCTTTA 17447 |||| | || || || || | | |||| ||||| | || || ||||||| || | Sbjct 30218 CCAACACGTGTTTGATAAAGTGTCTTTCATTGTCCGATATATTAA---GCCAGTCATTCA 30274 Query 17448 AATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACA 17507 || | | ||| | |||||| | ||||||||| || ||| |||| || ||||||| Sbjct 30275 TGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTTATACA 30334 Query 17508 TATTCCAAATATCATTGTATTGTATGGGGAATA 17540 | | |||||| ||| | |||||| || |||| Sbjct 30335 TGTCCCAAATCTCAGATTGTTGTATCGGAAATA 30367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517466609602800