Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq835 266 3e-66 >seq835 Length=76541 Score = 266 bits (294), Expect = 3e-66 Identities = 597/878 (68%), Gaps = 24/878 (3%) Strand=Plus/Plus Query 15917 TAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCCATA 15976 || || | ||||||||| || || ||||| |||||||| | | |||||| | ||||| Sbjct 29506 TATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGATATCATATCCATC 29565 Query 15977 AAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCC-GTAACTAATCT 16035 | ||||||||||||| |||| | ||| ||| | || ||| | ||||| |||| Sbjct 29566 CAGTCAAAGGGATTAGAAGCTTGATATAACTTGCTGACGCCAAGTGCATGTAAC-AATCG 29624 Query 16036 ATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAG-TCGTA 16094 ||| || ||||| || || ||||||| ||| || |||| ||||| || || ||| | Sbjct 29625 ATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCG-A 29683 Query 16095 CCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGG 16154 | ||||| | | | || ||||| |||||| || | ||| || || |||||| | Sbjct 29684 CTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAATGATTGCA- 29742 Query 16155 TGGCTCGTGT-TTCAGACGGTGTATGGTTTAGGTGTTTAAA---CATTAGACACGCGAAG 16210 || | | | ||| | | ||| ||| |||| | ||| ||||| || ||| Sbjct 29743 TGAATAGAGCCTTCTGGAAGCTTAT---TTACCAGTTTCGAGTACATCAGACATGCAAAG 29799 Query 16211 TCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATT 16270 || |||||||||||||| || | ||||| || || || ||||| | || ||||| Sbjct 29800 TCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATC 29859 Query 16271 TTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCCGAAAAGAATATACCCTC 16329 |||||||||||| | ||| ||||| | |||| ||||| || || || || || || || Sbjct 29860 AATCCTCGTTTCTTCAGCCAAAATATAG-AGCAGAATGATCCGGAGAAAAAGATTCCTTC 29918 Query 16330 AACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCAT-CTTTATTACGAATCCATT 16388 || | ||||| || | | || ||| || ||| |||| |||| || | ||||| Sbjct 29919 GACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCA-CCATT 29977 Query 16389 TCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATT 16448 || |||||| ||||| | | | || || ||||| || || | || | Sbjct 29978 TCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCACAGTAAAT 30037 Query 16449 TCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGT 16508 || |||||| ||| | || || |||||||||| ||| |||| ||| |||| Sbjct 30038 GCTGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGT 30097 Query 16509 GTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTT 16568 |||| || ||||| || || |||||||| || ||||||||||| || | || || || | Sbjct 30098 GTATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGAACCT 30157 Query 16569 C-CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAAC 16627 | | | |||| | || || || ||||| || || || ||||| || ||||| || Sbjct 30158 CACTGCTGAAATTCAT-GGCGAGATTTTCATTGACAATTCCATCACTGGCTGCAAAGAAG 30216 Query 16628 GCCAATATGTGCTTAATGAAATATTTTTC---GTCAGATGTAAGAATATGCCAATCTTTT 16684 ||||| | ||| || || || | | |||| ||| ||| | | || |||| || || Sbjct 30217 GCCAACACGTGTTTGATAAAGTGTCTTTCATTGTCCGAT---ATATTAAGCCAGTCATTC 30273 Query 16685 AAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATAC 16744 | || | | ||| | |||||||| ||||||||||| ||| |||| || |||||| Sbjct 30274 ATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTTATAC 30333 Query 16745 ATTTTCCAAATATCATTGTATTGTATGGGAAATACGAC 16782 || | |||||| ||| | |||||| ||||||| ||| Sbjct 30334 ATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGAC 30371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511336345377200