Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq835 143 3e-29 seq378 91.5 2e-13 >seq835 Length=76541 Score = 143 bits (158), Expect = 3e-29 Identities = 320/473 (68%), Gaps = 8/473 (2%) Strand=Plus/Minus Query 116729 GACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATC 116788 ||||| || | || || ||||| |||||| ||||||| || || ||||| || || || Sbjct 30251 GACAATGAAAGACACTTTATCAAACACGTGTTGGCCTTCTTTGCAGCCAGTGATGGAATT 30192 Query 116789 GTCAACGAGAATCTGGTCGAGCGTTTCGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTG 116847 ||||| || ||||| | | | |||| ||| ||||| ||| | |||| || || || Sbjct 30191 GTCAATGAAAATCTCGCCATGAATTTCAG-CAGTGAGGTTCAGATCCCCGAAGCTCGATG 30133 Query 116848 CTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCAT 116907 ||| ||||| ||||| || || || || || | ||||||||| |||||||| | || Sbjct 30132 CTTTTACGGATTTCAAATTGCAATAGAAAATATACACTCGGAAGTGTATTCGTTATTGAT 30073 Query 116908 CGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGAT 116967 || || ||| | | | || || | | ||| || ||| || || || || Sbjct 30072 TGATACATACATCAAAGATCCAACTGAAAAACAGCATTTACTGTGCGCGATTGAAACAAT 30013 Query 116968 GCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAG-AGGCCG 117026 |||||||| | | || || | |||||| || ||| || || || | ||| Sbjct 30012 CCCGTGCGTTACCAATAAAGCACAATGGGCGTTGAAATGGTGCGATC-CAAAGTATGCCT 29954 Query 117027 CCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTT 117086 | || | || | |||| ||||| ||||||||||| || |||| || || || | Sbjct 29953 CGTTTGCAGAAAGAGTGGTAGCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCAT 29894 Query 117087 TCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCC--TGACTTTCAGCAA 117144 || | | ||||||||||| |||||||| || | ||||| || | || ||||| || Sbjct 29893 TCTGCTCTATATTTTGGCTGAAGAAACGAGGATTGATGCCTGGACTTTGCTTTTCA--AA 29836 Query 117145 CGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGT 117197 ||||||||| | || || || || ||||| |||||||| ||| || ||| Sbjct 29835 TGAGCTCATCAGTCGTGATGAAGGACTACATTGTGACTTTGCATGTCTGATGT 29783 >seq378 Length=86116 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || || ||||| || || ||||| || || | || || ||| | | Sbjct 294 AATGCAAATTTTTGTTAAGACGCTGACTGGGAAAACTATTACGTTGGAAGTGGAATCTTC 353 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | | |||| || || | |||||||| || || || | ||||| Sbjct 354 AGATACTATCGACAATGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCAGACCA 413 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || || | || || ||||| ||||| |||| ||||| || || ||||| Sbjct 414 GCAACGTCTAATTTTTGCCGGTAAACAACTGGAAGACGGACGCACGCTTGCGGATTACAA 473 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||| ||| | ||||| ||||| || Sbjct 474 CATTCAGAAAGAGTCTACGCTTCATCTGGT 503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515140564669600