Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2154 95.1 1e-14 seq378 93.3 4e-14 seq3650 87.8 2e-12 seq3863 84.2 2e-11 >seq2154 Length=27549 Score = 95.1 bits (104), Expect = 1e-14 Identities = 137/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGA 118608 ||||||| ||||||||||| | || || ||||| | |||||||| ||| | | Sbjct 4273 CTTTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAA 4214 Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTT 118668 | | |||||| || |||||||| || || ||||||||| ||| || || || | | Sbjct 4213 TCAAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTAT 4154 Query 118669 CGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 118727 ||| ||||| | || | |||||||| | || | ||||| ||||| || || || || Sbjct 4153 CGATCGTGTCGGATGAT-TCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTCTTGACG 4095 Query 118728 AAAATCTGCAT 118738 ||||||||||| Sbjct 4094 AAAATCTGCAT 4084 >seq378 Length=86116 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCC 118586 ||||||||| | || || ||||| || ||||||||||| | || || | ||| || Sbjct 276 CACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATC-CGCA-AGCGTTCGTCCGTCT 219 Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 || || ||||| || ||| |||| ||||| |||||||| ||||| || || |||||||| Sbjct 218 TCTAGTTGTTTACCGGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTGTCC 159 Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706 || || || || | || | ||||| | |||||| || | || | ||| Sbjct 158 TGGATCTTCGCCTTCACGTTGTCAATAGTGTCTGATGACTCGACTTCCAAAGTTATAGTT 99 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || |||| ||||| ||||| |||||||| Sbjct 98 TTTCCAGTCAAGGTTTTCACAAATATCTGCAT 67 >seq3650 Length=4340 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || |||||||||||| |||| ||||| |||||||| ||||| || || || |||||| | Sbjct 1 AGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCTTTGTCTTGA 60 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||||| | ||| || || | || | || || Sbjct 61 ATCTTGGCCTTTACATTATCGATCGTGTCTGAAGACTCAACTTCCAAAGTGATGGTCTTT 120 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740 || || || ||||| |||||||||||||||| Sbjct 121 CCAGTAAGCGTTTTCACAAAAATCTGCATGG 151 >seq3863 Length=215 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || |||||||||||| |||| ||||| |||||||| ||||| || || |||||||| Sbjct 1 AGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGG 60 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | ||||||| |||||| || | || | ||||| Sbjct 61 ATCTTCGCCTTCACGTTGTCAATAGTGTCCGATGACTCGACTTCCAAAGTTATGGTTTTC 120 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || || |||||||| ||||| Sbjct 121 CCAGTCAGCGTCTTAACAAAAATTTGCAT 149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433765841969320