Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq835 266 3e-66 >seq835 Length=76541 Score = 266 bits (294), Expect = 3e-66 Identities = 525/762 (69%), Gaps = 31/762 (4%) Strand=Plus/Plus Query 13918 ATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCAT 13977 |||||| | ||| | ||| ||||| ||||| ||||| |||| ||| ||||| | ||||| Sbjct 29505 ATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGATATCATATCCAT 29564 Query 13978 AAAATCAAATGGATTTG----TTGACATAAACACTTTATCACAACCTAGTTCTAATAGTA 14033 | ||||| ||||| | |||| |||| ||| | || || ||| | || | Sbjct 29565 CCAGTCAAAGGGATTAGAAGCTTGATATAA---CTTGCTGACG-CCAAGTGCATGTAACA 29620 Query 14034 ATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTT 14093 ||| |||||| | ||||| || |||||| ||| ||| ||||||| || ||||| | Sbjct 29621 ATCGATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCT 29680 Query 14094 TTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAA 14153 || |||| | || || |||||||| ||| || || || ||| ||| | Sbjct 29681 CGACTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGA---AATGA 29737 Query 14154 TCGTAATAATTT--CATTAGAAGGAGGATATTTTAGATGTTTAAAA---ATTAAACACGC 14208 | | | ||| | || ||| | | |||| |||| | || | ||| || Sbjct 29738 TTGCATGAATAGAGCCTTCT--GGAAGCTTATTTACCAGTTTCGAGTACATCAGACATGC 29795 Query 14209 AAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGG 14268 ||| |||||||| || || ||||| | ||| || || || |||||||| | ||| || Sbjct 29796 AAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGG 29855 Query 14269 CATCAATCCTCGtttttttAACCAAAATATTGCAGC-GAATGATCCGGAAAAGAATATTC 14327 ||||||||||||||| || | ||||||||| | ||| |||||||||||| || || |||| Sbjct 29856 CATCAATCCTCGTTTCTTCAGCCAAAATATAG-AGCAGAATGATCCGGAGAAAAAGATTC 29914 Query 14328 CCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTT--TTTTGTTCGATAT 14385 | || || || ||||| |||| | || |||| ||||||| || | ||| | ||| Sbjct 29915 CTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCG--CA 29972 Query 14386 CCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAA 14445 |||||| ||||||| | ||| || ||| | ||||||||||| || | Sbjct 29973 CCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCACAG 30032 Query 14446 TAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 14505 |||||| | || || | | | | |||||||||||||| | ||| ||||| ||| Sbjct 30033 TAAATGCTGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTC 30092 Query 14506 AGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTG 14565 |||||||| ||||| || || || ||||| || ||||| |||| |||||| | || Sbjct 30093 CGAGTGTATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTG 30152 Query 14566 TACCT--CTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCA 14623 |||| ||| ||| || | ||| | ||||||||| || || |||||||| |||||| Sbjct 30153 AACCTCACTGCTGAAATTCAT--GGCGAGATTTTCATTGACAATTCCATCACTGGCTGCA 30210 Query 14624 AAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG 14665 || || ||||| | || ||| ||||||| | || ||||||| Sbjct 30211 AAGAAGGCCAACACGTGTTTGATAAAGTGT--CT-TTCATTG 30249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482271982002800