Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq835 260 2e-64 seq500 212 8e-50 >seq835 Length=76541 Score = 260 bits (288), Expect = 2e-64 Identities = 439/626 (70%), Gaps = 11/626 (2%) Strand=Plus/Plus Query 36150 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 36209 |||||| |||||| || || || ||||| || || || | ||| || | || || |||| Sbjct 29783 ACATCAGACATGCAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAA 29842 Query 36210 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 36268 | ||||| ||||| | || || || || ||||||||||| || ||| |||||||| Sbjct 29843 AGCAAAGTCCAGGCATCAATCCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCG 29901 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 36328 || || || |||||||| || ||||||||||| | | ||| ||| || | |||| Sbjct 29902 GAGAAAAAGATTCCTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATAC 29961 Query 36329 TCATGTATC-CACT-TTTGA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 36384 | || ||| ||| ||| | ||||| | || || || | || || || ||||| || Sbjct 29962 TT-TGGATCGCACCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTC 30020 Query 36385 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAG 36444 || || | | || | ||||||| | |||||| | |||||||||||||| | Sbjct 30021 AATCGCGCACAGTAAATGCTGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAA 30080 Query 36445 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGC 36504 ||||| |||||| || || ||||| || || |||||||||||||| || |||| ||| Sbjct 30081 CGAATACACTTCCGAGTGTATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGC 30140 Query 36505 CTCGGTAATCTGTACTTCTGTAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCG 36562 |||| ||||| || || | | ||| || | || | ||||||||| || ||||| Sbjct 30141 TTCGGGGATCTGAACCTCACTGCTGAAATTCATG--GCGAGATTTTCATTGACAATTCCA 30198 Query 36563 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGT 36622 |||||||||||||| || ||||| || ||||| ||||| | | |||| || | || Sbjct 30199 TCACTGGCTGCAAAGAAGGCCAACACGTGTTTGATAAAGTGTCTTTCATTGTCCGATATA 30258 Query 36623 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 36682 ||| ||| ||||| || || | | ||| | |||||| | |||||||| |||| Sbjct 30259 TTAAGCCAGTCATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCC 30318 Query 36683 TCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTA 36742 ||||| || |||||||| | ||| || ||| | ||| || ||||| | ||||| | Sbjct 30319 TCTGCTTTCTTATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGG 30378 Query 36743 TTTTGATTTTTTGCAAGGATTGGTTC 36768 || |||||| | ||| | ||||| Sbjct 30379 TTCGGATTTTCTCGAAGAAAAGGTTC 30404 >seq500 Length=28399 Score = 212 bits (234), Expect = 8e-50 Identities = 1400/2241 (62%), Gaps = 38/2241 (2%) Strand=Plus/Plus Query 64869 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 64928 || || |||||||||||||| ||||| ||||| ||||| |||| |||||||| Sbjct 22556 GTTCGGAGATAGTACATTCCTGTTTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGAA 22615 Query 64929 GTTAGTTTGGAATAAC--TCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGA 64986 || ||||| | | || |||| || || || || ||||| | |||||||| ||| | Sbjct 22616 GTGAGTTT--ACTGACAGTCGGGTCGGCAATGTGAATATTAAGTGATTGACTCTGACAAA 22673 Query 64987 TGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAG 65046 || | ||||| | || |||||||| | | |||| |||||| |||||||||| | Sbjct 22674 TGTACGCTCCTCGATCGGCAGCCATGTCCAAAATCGCCTTTTGCTTGATTTCCCAAACTG 22733 Query 65047 TTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCAT 65103 |||| || | || | || |||| | | |||| || | ||| || | || Sbjct 22734 TTTTGTACTTTTCTTTCACATGAGGCGGAATTTCAGCGATATTTTGTACGGAACCGCGAT 22793 Query 65104 CTGCCATAATCCTATTCTTGATCTCATCAT-TCCATAATTTTCTCTCGGTTAAAACTCTA 65162 | | || |||| | || | || |||| || || |||| | || |||| Sbjct 22794 CGCGAAGGATTTGATTCCGAACGTC-TGATGTCCACAAATTCATCTCAAT--AAGCTCTT 22850 Query 65163 --AGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATAT 65220 | ||||| || || | | ||||||||||| | || | ||| || | || | Sbjct 22851 CCATGAGATATTTGTTGACAATTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATGT 22910 Query 65221 TACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCG 65280 | || |||| || | |||||| ||| || | ||||||||| ||||| || || | Sbjct 22911 TGGAAGTGAACGGCTCGATAGACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTTG 22970 Query 65281 GCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAG 65340 |||| || || | || ||| |||| | |||| || | || ||||| | Sbjct 22971 GCATCGGAGCGAGCAGCAAAGAGTTTCGGATTCCGTGAGTAGCTACTTGCTCTTTCAACT 23030 Query 65341 GTTCCCAATTCCAAAGATCCGAC---GGTACAACNNNNNNNNNNNNNNNTTGTAGAATAC 65397 | | ||||| ||| || | || || | || ||| | |||| Sbjct 23031 GCTTCCAATCCCATCGACCGGAATCGGGAATGACCTGCCACATATCAAATTGAAAGATAC 23090 Query 65398 CGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCAC 65457 | ||| | ||||| |||| | ||||| ||||| | | || | ||| Sbjct 23091 CTCGACTAACTGGTGATCCAGCATAGCTCTCGTACGGTCCGAGTTCCCGTGCCAATTCCA 23150 Query 65458 AACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTG 65517 || || | || || |||| || ||||| || || | || || || || | | Sbjct 23151 TGGAAGCTTCCATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGCGAG 23210 Query 65518 CTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACAC 65577 | | ||| ||||||||| | | | || | ||||| || || | |||||||| | Sbjct 23211 CAGCTTTGCTTTCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGAACGC 23270 Query 65578 CAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAAT 65637 | || || || |||| ||||| || ||| | || ||||| ||||| |||||||||| Sbjct 23271 CGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGCTTCAGGAATCGGATAATAAT 23330 Query 65638 TAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGA 65697 | | ||| || ||||| ||||||||| | || | ||| | || | | ||| Sbjct 23331 TGAGATCAATGATTTTGTTGAGATTTTTCGTAACGATTTTTGTGATTTCGTATAATTTTG 23390 Query 65698 GAAAATCAAATCGCTCATCTATTACAAACATGTT--CAATGCAACAGATGCCAGATTACA 65755 ||| | |||| | ||| |||| | || || |||||| | || |||| ||| || Sbjct 23391 CAAACTGAAATTCTT--TCTGATACACAAATTTTGACAATGCGATGGAAGCCAAATTGCA 23448 Query 65756 AACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTT 65815 || || || || || | || | || | || || ||| ||| ||||| || | Sbjct 23449 TACTGCCACTTCTTTGGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTGCTTGATCG 23508 Query 65816 GATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 65875 |||||||| | ||| || ||||| || ||||| || || || ||||| || | Sbjct 23509 AATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAAAGCATATA 23568 Query 65876 TGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT-CGAGCCTTTA 65934 || || || || ||||||||| || | ||| || ||| | | | | | |||| Sbjct 23569 CGGCGTTCCGGTCTCAATCTGACTATCCAAAATGGCAAACCACA--ATTGCTGGGCTTTG 23626 Query 65935 TTATAGATTT---GTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGT 65991 | || || | | |||| ||||| | ||| || || || ||| Sbjct 23627 --ACAGTCTTTCGGGCAATGTTTTGAGACTCGTACTTTTCATATAACGCATCAAATTCGC 23684 Query 65992 CTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 66051 |||||| | | | || ||| || | |||||| | || ||| ||| || Sbjct 23685 TTCCCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCATTCTTGGT 23744 Query 66052 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGG 66111 || | ||| ||||||||||| ||||| || ||||||||||| ||| ||||||| | Sbjct 23745 TGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAACAAATCTCGAG 23804 Query 66112 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAAT 66171 || ||| || ||||| |||||| || || || ||| | | ||||| || Sbjct 23805 CTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATATCCGCAT 23864 Query 66172 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 66231 |||| || || | || || || | | || ||| || || || ||||| | || Sbjct 23865 GCCAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCACCTTGATCAACGT 23924 Query 66232 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGG 66291 ||| ||| |||| ||| | || | | |||||||| ||| ||||| || | ||||| | Sbjct 23925 ATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTTCCATTCG 23984 Query 66292 TCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTG 66351 ||||| ||||| || | | |||||||| ||| | || || || || | Sbjct 23985 TCCCGCGAATATAACTGTTGGTGGAGCGAATATTGGAAATACTGACGCCAATACCGCCAG 24044 Query 66352 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCAT 66411 || || || || | || ||| |||| | ||| || || ||||| || ||| ||||| Sbjct 24045 CCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCAT 24104 Query 66412 CCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATA 66471 | |||| | ||||||||| || | ||| | ||| ||||||||||| || | Sbjct 24105 CTTGCATGGATAATAGAAAACACGACGATAATTGAGGTCGAGGCGTTCCCGCATTGAAAA 24164 Query 66472 AGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTG 66531 || |||| || |||||||| | |||| || | | | ||||| || | | | | Sbjct 24165 GCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCCAAAACGG 24224 Query 66532 AGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTT 66591 || | || | || || || || || || || ||||||| ||| || || || | || Sbjct 24225 CATCCAAATTCTCTTTGTGTATGCCGACAGCCACTCGCATTATCATATGTTGTGGGCGTT 24284 Query 66592 CAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAAT 66651 || | || || | ||||| || ||||| |||| ||||||||| ||||||| Sbjct 24285 CACACACTTTTCCATTCACACGCAACAGATACGATTTCTCCAGAGTTTTAAAGCCAAAAT 24344 Query 66652 AGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGT 66711 ||| ||| |||||||| || ||||| | || ||||| || || | | Sbjct 24345 AGTCGTAATCAAAGTCTCTATCACCGATAATGGCGGAATTGAGAGCTTCTTTGTTCTCCA 24404 Query 66712 TAACTACATCCATGGTAATACTTG--AAATAATCGGAGAATG---TTTCCCATTTTTAGG 66766 |||| | || ||| || ||| | |||| |||| | ||| ||| | Sbjct 24405 TAAC-AATTCGATGCACATCGTTGGCGATTAAT-GGAGCGGGTACTTTGGTGGTTTCGTG 24462 Query 66767 ATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTG 66826 || | || ||||| | || |||||| || | ||| ||||| | ||| || Sbjct 24463 CTTATTTTCGTAAAATAA---TTGAATGTTTTCACTGAAGACTTTGTTTGTATTTTTATG 24519 Query 66827 TAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACA 66886 || ||| || | || |||| ||| || | ||| |||| ||||||||||| | || Sbjct 24520 TAAATTGGAAATAGCAATTCGAGCAGCCAATTTGGAGAAATCGGGATGTTGTGTGCTGCA 24579 Query 66887 AGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATAT 66946 ||||| |||| ||||||| ||||||||| || || || || ||| | Sbjct 24580 GTAAGCTGCGGTTTCTGCTGCCAATTCGTCCAATTCCGATGTGGTGACGCCCGGATACAC 24639 Query 66947 TCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATA 67006 || || || ||| || ||||| | ||||| | | || ||||||||| || Sbjct 24640 GCCAGCAATCACTTTCTGAGATATTTGGACGGGATCAACGTATTCTGTGTTTAAGTTGTA 24699 Query 67007 ACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCATT 67066 || | |||| | || || | |||||||| || || |||| ||| || ||| | Sbjct 24700 GCAGAGTTTTGTGATTCGCGCAGTGATTTTGTCGAATTTGACGACTTCTTTTCGTCCGTC 24759 Query 67067 TCGTTTAATGACAAACATTTT 67087 ||||| |||||| ||||||| Sbjct 24760 ACGTTTGATGACATACATTTT 24780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658072346376400