Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq835 104 2e-17 >seq835 Length=76541 Score = 104 bits (114), Expect = 2e-17 Identities = 286/420 (68%), Gaps = 20/420 (5%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATT-TGCGGCCATATTCTGGCT 22808 ||||||||||| || ||||| || | || || || ||||| ||| | ||||| ||||| Sbjct 29933 GCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGCT-CTATATTTTGGCT 29875 Query 22809 GAAGAAACGTTCGCTCATGCCAGGG-TTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 ||||||||| | ||||| || || || ||||| || ||| | || || ||||| | Sbjct 29874 GAAGAAACGAGGATTGATGCCTGGACTTTGC-TTTTCAAATGAGCTCATCAGTCGTGATG 29816 Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTC 22927 |||| ||||| ||||||||||| ||| || ||| | || ||| ||| || | | | Sbjct 29815 AAGGACTACATTGTGACTTTGCATGTCTGATGTACTCGAAACTGGTAAATAAGC--TTCC 29758 Query 22928 AGGACGATGCA--CATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCA 22985 || | | | | ||| |||||| || || |||||| ||| || | || | | Sbjct 29757 AGAAGGCTCTATTCATGCAATCATTTCCGACGCCGTTATCATCGAACAAGAATTTGTACG 29698 Query 22986 AGAGGCAC-TAAAGACACCCCTACTTGGTATGAATAGTGACAGT---ATGAGACTGTACA 23041 ||| ||| | || | ||| |||| |||||| | | ||| ||| | | |||| Sbjct 29697 AGATTCACTTCCAGTC-GAGCTAATTGGAATGAAT--TCA-AGTTTGATGGGTCAATACA 29642 Query 23042 TACAGTTTGTTGCAGATCGCCTGCTCGATGC-CCTGGGTTATGCAAAGATGTATAACGTT 23100 | ||||||| || ||||| || | |||| | ||| | || ||| | ||| | | | Sbjct 29641 TCGAGTTTGTGGCGGATCGATTGTTACATGCACTTGGCGTCAGC-AAGTTATATCAAGCT 29583 Query 23101 GCCAATCCATTTGATTTCATGGATAACATTAGCATTG-AAGGTAAAACAAACTTCTTTGA 23159 | ||||| ||||| | ||||||| | || | || |||| ||||||||||| ||||| Sbjct 29582 TCTAATCCCTTTGACTGGATGGATATGA-TATCTCTGCAAGGAAAAACAAACTTTTTTGA 29524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356180589100630