Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq500 300 2e-76 seq835 273 3e-68 >seq500 Length=28399 Score = 300 bits (332), Expect = 2e-76 Identities = 1431/2248 (64%), Gaps = 52/2248 (2%) Strand=Plus/Plus Query 78748 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTC 78807 || || |||||||||||||| ||||| ||||| ||||| ||||||||||||| Sbjct 22556 GTTCGGAGATAGTACATTCCTGTTTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGAA 22615 Query 78808 GTTAGTTTGGAATAAC--TCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGA 78865 || ||||| | | || |||| || || || || ||||| | |||||||| ||| | Sbjct 22616 GTGAGTTT--ACTGACAGTCGGGTCGGCAATGTGAATATTAAGTGATTGACTCTGACAAA 22673 Query 78866 TGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAG 78925 || | ||||| | || |||||||| | | |||| |||||| |||||||||| | Sbjct 22674 TGTACGCTCCTCGATCGGCAGCCATGTCCAAAATCGCCTTTTGCTTGATTTCCCAAACTG 22733 Query 78926 TTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCAT 78982 |||| || | || | || |||| | | |||| || | ||| || | || Sbjct 22734 TTTTGTACTTTTCTTTCACATGAGGCGGAATTTCAGCGATATTTTGTACGGAACCGCGAT 22793 Query 78983 CTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTA- 79041 | | || |||| | ||| |||| || || |||| | || |||| Sbjct 22794 CGCGAAGGATTTGATTCCGAACGTCTGATGTCCACAAATTCATCTCAAT--AAGCTCTTC 22851 Query 79042 -AGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATT 79100 | ||||| || || | | ||||||||||| | || | ||| || | || || Sbjct 22852 CATGAGATATTTGTTGACAATTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATGTT 22911 Query 79101 ACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGG 79160 || | || || | || || ||| || | ||||||||| ||||| || ||||| Sbjct 22912 GGAAGTGAACGGCTCGATAGACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTTGG 22971 Query 79161 CATAGGTGCCACCAATAAACTATTTCTAAGACCGTATG-ATCTGATTTTATCTTTTAGAG 79219 ||| || || | || ||| |||| | |||| | | || | || ||||| | Sbjct 22972 CATCGGAGCGAGCAGCAAAGAGTTTCGGATTCCGTGAGTAGCT-ACTTGCTCTTTCAACT 23030 Query 79220 ATTCCCAATCCCAAAGATCAGA--CGGGACA-ACATTCCAAAGATCATATTGTAGAATAC 79276 | ||||||||| || | || ||||| || | ||| | |||| |||| | |||| Sbjct 23031 GCTTCCAATCCCATCGACCGGAATCGGGAATGACCTGCCACATATCAAATTGAAAGATAC 23090 Query 79277 CGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCC---TTCCTTTTCGGCTAATT 79333 | |||| | |||||| | || | || || ||||| |||| | || |||| Sbjct 23091 CTCGACTAACTGGTGATCCAGCATAGCTCTCGTACGGTCCGAGTTCCCGT---GCCAATT 23147 Query 79334 CACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTT 79393 | || || | || || |||| || ||||| ||||| | || ||||| || Sbjct 23148 CCATGGAAGCTTCCATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGC 23207 Query 79394 GTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 79453 | || || ||| ||||||||| | | | || | ||||| || || | ||||||| Sbjct 23208 GAGCAGCTTTGCTTTCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGAA 23267 Query 79454 CACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAAT 79513 | || || || || |||| ||||| || ||| | || ||||| ||||| ||||||| Sbjct 23268 CGCCGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGCTTCAGGAATCGGATAAT 23327 Query 79514 AATTAATATCTATAATTTTATTGAGATT---CCTGACTATTACTTTGACCACATCCTTTA 79570 |||| | ||| || ||||| |||||||| | | || ||| | ||| || | || Sbjct 23328 AATTGAGATCAATGATTTTGTTGAGATTTTTCGTAACGATTTTTGTGATT---TCGTATA 23384 Query 79571 GTTTGAGAAAATCAAATCGTCCATCTATTACAAACATGTT--CAACGCGACAGATGCCAG 79628 ||| ||| | |||| || ||| |||| | || || ||| |||| || |||| Sbjct 23385 ATTTTGCAAACTGAAAT--TCTTTCTGATACACAAATTTTGACAATGCGATGGAAGCCAA 23442 Query 79629 ATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACT 79688 ||| || || || || || || | || | || | || |||||| |||||| || || Sbjct 23443 ATTGCATACTGCCACTTCTTTGGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTGCT 23502 Query 79689 ACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAG 79748 | ||||||||| | ||| || ||||| || ||||| || || || ||||| Sbjct 23503 TGATCGAATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAAAG 23562 Query 79749 AATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT-CGAG 79807 || |||| || || || ||||||||| || | ||| || ||| | | | | | Sbjct 23563 CATATACGGCGTTCCGGTCTCAATCTGACTATCCAAAATGGCAAACCACA--ATTGCTGG 23620 Query 79808 CCTTTATTATAGACTT---GTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGA 79864 |||| | || ||| | | |||| ||||| | | |||||| || | Sbjct 23621 GCTTTG--ACAGTCTTTCGGGCAATGTTTTGAGACTCGTACTTTTCATATAACGCATCAA 23678 Query 79865 ACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACT 79924 | ||| |||||| || | | || ||| |||| ||||| | || ||| | Sbjct 23679 ATTCGCTTCCCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCATT 23738 Query 79925 CTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 79984 || | || | || ||||||||||| ||||| || ||||||||||| ||| | || Sbjct 23739 CTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAACAAAT 23798 Query 79985 CTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATAT 80044 ||| | || ||| || ||||| |||||| || || || ||| | | |||| Sbjct 23799 CTCGAGCTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATAT 23858 Query 80045 CAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTC-GTTTGTTTCCTCCCTGA 80103 | | |||||| || || | || || || | || ||| || | || || || ||| Sbjct 23859 CCGCATGCCAGGGCTCTAGATAAATTGCAA-AAGACCCTTTCCGCTTCCCACCACCTTGA 23917 Query 80104 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTA 80163 || | ||||| ||| |||| ||| | || | | |||||||| ||| ||||| || | Sbjct 23918 TCAACGTATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTT 23977 Query 80164 CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATT 80223 ||||| |||||| ||||| || ||| |||||||| ||| | || || Sbjct 23978 CCATTCGTCCCGCGAATATAACTGTTGGTGGAGCGAATATTGGAAATACTGACGCCAATA 24037 Query 80224 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATG 80283 || || ||| || || || | || ||| |||| | ||| || || ||||| || || Sbjct 24038 CCGCCAGCCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATA 24097 Query 80284 CTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCA 80343 |||||| |||| | ||||||||| || | ||| | ||| ||||||||| Sbjct 24098 GAATCATCTTGCATGGATAATAGAAAACACGACGATAATTGAGGTCGAGGCGTTCCCGCA 24157 Query 80344 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCA 80403 || || | || |||| || |||||||| | |||| |||| | | ||||| || Sbjct 24158 TTGAAAAGCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCC 24217 Query 80404 ATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGA 80463 | | | | || | || | || || || || || || || ||||||| ||| || || Sbjct 24218 AAAACGGCATCCAAATTCTCTTTGTGTATGCCGACAGCCACTCGCATTATCATATGTTGT 24277 Query 80464 GGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAA 80523 || | |||| | || ||| | ||||| || ||||| |||| ||||||||| Sbjct 24278 GGGCGTTCACACACTTTTCCATTCACACGCAACAGATACGATTTCTCCAGAGTTTTAAAG 24337 Query 80524 CCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTA 80583 |||||||||| ||| |||||||| || ||||| | || ||||| || || Sbjct 24338 CCAAAATAGTCGTAATCAAAGTCTCTATCACCGATAATGGCGGAATTGAGAGCTTCTTTG 24397 Query 80584 TATTTGTTAACTACATCCATGGTGATACTTG--AAATAATCGGAGAATG---TTTCCCAT 80638 | | |||| | || ||| || ||| | |||| |||| | ||| Sbjct 24398 TTCTCCATAAC-AATTCGATGCACATCGTTGGCGATTAAT-GGAGCGGGTACTTTGGTGG 24455 Query 80639 TTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTT 80698 ||| | ||| | || ||||| | || |||||| || | ||| ||||| | Sbjct 24456 TTTCGTGCTTATTTTCGTAAAATAA---TTGAATGTTTTCACTGAAGACTTTGTTTGTAT 24512 Query 80699 CCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTG 80758 || |||| ||| || | || |||| || || || ||| |||| |||||||||| Sbjct 24513 TTTTATGTAAATTGGAAATAGCAATTCGAGCAGCCAATTTGGAGAAATCGGGATGTTGTG 24572 Query 80759 TAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCAT 80818 | | || ||||| |||| ||||||| ||||||||| || || || || Sbjct 24573 TGCTGCAGTAAGCTGCGGTTTCTGCTGCCAATTCGTCCAATTCCGATGTGGTGACGCCCG 24632 Query 80819 TATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTA 80878 ||| | || || || ||| || ||||| | ||||| | | || ||||||| Sbjct 24633 GATACACGCCAGCAATCACTTTCTGAGATATTTGGACGGGATCAACGTATTCTGTGTTTA 24692 Query 80879 AGCCATAACATAATTTTCTAATACGAGACGTGATTTTATCAAACATGACATTTTCCTTGT 80938 || || || | |||| | || || | |||||||| || || |||| ||| || Sbjct 24693 AGTTGTAGCAGAGTTTTGTGATTCGCGCAGTGATTTTGTCGAATTTGACGACTTCTTTTC 24752 Query 80939 ATCCATTTCGTTTAATGACAAACATTTT 80966 ||| | ||||| |||||| ||||||| Sbjct 24753 GTCCGTCACGTTTGATGACATACATTTT 24780 >seq835 Length=76541 Score = 273 bits (302), Expect = 3e-68 Identities = 602/892 (67%), Gaps = 23/892 (3%) Strand=Plus/Plus Query 49675 TATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATG 49734 ||||| || || ||||| || ||||| || |||||||||| || ||||| | ||||| Sbjct 29506 TATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGATATCATATCCATC 29565 Query 49735 AAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTA 49794 | ||||| ||||| | | | | ||| | || | | || | | || | ||||| | Sbjct 29566 CAGTCAAAGGGATTAGAAGCTTGATATAACTTGCTGACGCCAAGTGCATGTAACAATCGA 29625 Query 49795 TCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACT 49854 ||||| ||||| || || ||| ||||| |||||||||| || || | ||| Sbjct 29626 TCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGACT 29685 Query 49855 GGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTA 49914 ||||| | | | |||||||||||| ||| || || || | || || | | Sbjct 29686 GGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAATGATTGCATGA 29745 Query 49915 ACGGTTTCTTCACTCGGTGGATGCAA---TAAATGTTTAAA---CATCAAACATGCGAAA 49968 | | |||| |||| || || |||| | ||||| |||||| || Sbjct 29746 ATAGAGCCTTC------TGGAAGCTTATTTACCAGTTTCGAGTACATCAGACATGCAAAG 29799 Query 49969 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 50028 || || || || || || || | ||| || || || || ||||| ||||| ||||| Sbjct 29800 TCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATC 29859 Query 50029 AGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCAGAAAAGAAGATTCCTTC 50087 | || || || || ||||||||||| || ||| ||||| || || || ||||||||||| Sbjct 29860 AATCCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCGGAGAAAAAGATTCCTTC 29918 Query 50088 TACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATC-CACT-TT 50145 || || |||||||| || | ||| ||| || | ||| | || ||| ||| || Sbjct 29919 GACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTT-TGGATCGCACCATT 29977 Query 50146 TGA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 50203 | | ||||| | || || || | || || || || ||||| || || | | || Sbjct 29978 TCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCACAGTAAAT 30037 Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263 | ||||||| | |||||| | || ||||| ||||| | ||||| |||||| | Sbjct 30038 GCTGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGT 30097 Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323 | || ||||| || || || ||||||||||| || |||| ||| |||| ||||| || | Sbjct 30098 GTATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGAACCT 30157 Query 50324 CTGTACAAAATCGTTCA--GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 50381 | | | || |||| || | ||||||||| || ||||| |||||||||||||| || Sbjct 30158 CACTGCTGAAA--TTCATGGCGAGATTTTCATTGACAATTCCATCACTGGCTGCAAAGAA 30215 Query 50382 CGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGAT 50441 ||||| || ||||| ||||| ||| |||| ||| | || ||| ||| ||||| || Sbjct 30216 GGCCAACACGTGTTTGATAAAGTGTCTTTCATTGTCCGATATATTAAGCCAGTCATTCAT 30275 Query 50442 ATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 50501 || | | ||| | |||||| | |||||||| ||||||||| || |||||||| Sbjct 30276 GTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTTATACAT 30335 Query 50502 ATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 50553 | ||| || ||| | ||| || || || | ||||| | || |||||| Sbjct 30336 GTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGGTTCGGATTT 30387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718159174224400