Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq500 257 2e-63 seq835 237 2e-57 >seq500 Length=28399 Score = 257 bits (284), Expect = 2e-63 Identities = 1038/1623 (64%), Gaps = 28/1623 (2%) Strand=Plus/Plus Query 71441 AATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGAT 71500 |||| || ||||| ||||| | || ||||| || | || | ||| ||||||||| Sbjct 23172 AATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGCGAGCAGCTTTGCTTTCAAATGGAA 23231 Query 71501 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTC 71560 | | | || | ||||| || || | ||||||||||| || || || |||| |||| Sbjct 23232 GACTCATCAGTAAAAACGTATCGGCAAGACCTTGAACGCCGATTCCAATCGGTCGATGTC 23291 Query 71561 TCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGA 71620 || ||| | || ||||| ||||| ||||||||||| | ||| || ||||| |||| Sbjct 23292 GCTGATTGCTCACTTGTGCTTCAGGAATCGGATAATAATTGAGATCAATGATTTTGTTGA 23351 Query 71621 GATTTCTG---ACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCAT 71677 ||||| | || ||| | ||| || | || ||| ||| | |||| | | Sbjct 23352 GATTTTTCGTAACGATTTTTGTGATT---TCGTATAATTTTGCAAACTGAAATT--CTTT 23406 Query 71678 CTATTACAAACACGTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 71735 || |||| | | || ||| || | || |||| ||| || || || || || || | Sbjct 23407 CTGATACACAAATTTTGACAATGCGATGGAAGCCAAATTGCATACTGCCACTTCTTTGGA 23466 Query 71736 ATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 71795 || | || | || |||||| ||| ||||| || | |||||||| | ||| || Sbjct 23467 GTCTGAGTACTCGATGATTTCACAGCAGAGATTGCTTGATCGAATGGTTCCAAGATTCTG 23526 Query 71796 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAAT 71855 ||||| || ||||| || || || ||||| ||| |||| || || || ||||| Sbjct 23527 CTGATTGGATTTACGATTACAAGCGTCTTTGTAAAGCATATACGGCGTTCCGGTCTCAAT 23586 Query 71856 CTGAGATTCTATAATCGCTTTCCAGACGACT-CGAGCCTTTATTATATTCTT---GTATC 71911 |||| || | ||| || ||| | | | | | |||| | | |||| | Sbjct 23587 CTGACTATCCAAAATGGCAAACCACA--ATTGCTGGGCTTTG--ACAGTCTTTCGGGCAA 23642 Query 71912 TCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTA 71971 | |||| ||||| | | |||||| || || ||| |||||| | | | | Sbjct 23643 TGTTTTGAGACTCGTACTTTTCATATAACGCATCAAATTCGCTTCCCCATGTCTCATAAA 23702 Query 71972 ATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCA 72031 || ||| || |||||||| | || ||| ||| | || | || ||||||| Sbjct 23703 GTCGTGGAGCCTCGTTCGGACAGAATAAACTCCATTCTTGGTTGTCTTCCACACGTTTCA 23762 Query 72032 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTC 72091 |||| ||||| || ||||||||||| ||| | ||||| | || ||| || |||| Sbjct 23763 TAAACAGATCGGGGATCCAAAGAGCATAAAACAAATCTCGAGCTCGATGGAGTTCATTTC 23822 Query 72092 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 72151 | |||||| || || || ||| | | ||||| | |||||| || || | || | Sbjct 23823 CATGATTCTTACGTAGTTCCAGAAACTCAAAGATATCCGCATGCCAGGGCTCTAGATAAA 23882 Query 72152 TGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 72211 | || | | || ||| || || || ||||| | ||||| ||| |||| ||| Sbjct 23883 TTGCAAAAGACCCTTTCCGCTTCCCACCACCTTGATCAACGTATCGAGCTGTGTCATTGA 23942 Query 72212 AAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTC 72271 | || | | |||||||| ||| ||||| || ||||| |||||| ||||| || Sbjct 23943 ACACCCGAAGCATTGGAACAATTCCATTCGAACTTCCATTCGTCCCGCGAATATAACTGT 24002 Query 72272 CACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 72331 ||| ||||||||| ||| | || || || || ||| || || || | | Sbjct 24003 TGGTGGAGCGAATATTGGAAATACTGACGCCAATACCGCCAGCCCACTTTGAAATACACG 24062 Query 72332 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 72391 | ||| |||| | ||| || || ||||| || ||| |||||| |||| | ||||| Sbjct 24063 CACATTGTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCATCTTGCATGGATAATAGAA 24122 Query 72392 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 72451 |||| || | ||| | ||| ||||||||||| || | || |||| || |||| Sbjct 24123 AACACGACGATAATTGAGGTCGAGGCGTTCCCGCATTGAAAAGCGTCGGAGTTGCATGCG 24182 Query 72452 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGAT 72511 |||| | |||| |||| | | ||||| || | | | | || | || | || | Sbjct 24183 TAAAGAACTTTTGTGACATGTGTTCATACGTTTCCAAAACGGCATCCAAATTCTCTTTGT 24242 Query 72512 GTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTA 72571 |||| || || || || ||||||| |||||| || || | |||| | || ||| | Sbjct 24243 GTATGCCGACAGCCACTCGCATTATCATATGTTGTGGGCGTTCACACACTTTTCCATTCA 24302 Query 72572 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 72631 ||||| || ||||| |||| ||||||||| |||||||||| ||| |||||||| Sbjct 24303 CACGCAACAGATACGATTTCTCCAGAGTTTTAAAGCCAAAATAGTCGTAATCAAAGTCTC 24362 Query 72632 GTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGA 72691 || ||||| | |||||||| || || | | |||| || || ||| | Sbjct 24363 TATCACCGATAATGGCGGAATTGAGAGCTTCTTTGTTCTCCATAACAAT-TCGATGCACA 24421 Query 72692 TACTTG--AAATAATCGGAGAATG---TTTCCCATTTTTAGGATTAACATAGTTGAATAA 72746 | ||| | |||| |||| | ||| ||| | ||| | || ||||| Sbjct 24422 TCGTTGGCGATTAAT-GGAGCGGGTACTTTGGTGGTTTCGTGCTTATTTTCGTAAAATAA 24480 Query 72747 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTAT 72806 | || |||||| || | ||| ||||| | || |||| ||| || | || || Sbjct 24481 ---TTGAATGTTTTCACTGAAGACTTTGTTTGTATTTTTATGTAAATTGGAAATAGCAAT 24537 Query 72807 TCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGC 72866 || || || | ||| |||| ||||||||||| | || ||||| ||||||| Sbjct 24538 TCGAGCAGCCAATTTGGAGAAATCGGGATGTTGTGTGCTGCAGTAAGCTGCGGTTTCTGC 24597 Query 72867 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 72926 ||||| ||||||||| || || || || ||| | || || || ||| Sbjct 24598 TGCCAATTCGTCCAATTCCGATGTGGTGACGCCCGGATACACGCCAGCAATCACTTTCTG 24657 Query 72927 AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACG 72986 || ||||| | ||||| | | || ||||||||| || || | |||| | || || Sbjct 24658 AGATATTTGGACGGGATCAACGTATTCTGTGTTTAAGTTGTAGCAGAGTTTTGTGATTCG 24717 Query 72987 AGACGTGATTTTATCAAACATAACATTTTCCCGGCATCCATTTCGTTTAACGACAAACAT 73046 | |||||||| || || | || ||| | ||| | ||||| | |||| |||| Sbjct 24718 CGCAGTGATTTTGTCGAATTTGACGACTTCTTTTCGTCCGTCACGTTTGATGACATACAT 24777 Query 73047 TTT 73049 ||| Sbjct 24778 TTT 24780 Score = 95.1 bits (104), Expect = 2e-14 Identities = 134/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 70831 GTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 70890 || || ||||||||||| |||||||| ||||| ||||| |||| |||||||| Sbjct 22556 GTTCGGAGATAGTACATTCCTGTTTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGAA 22615 Query 70891 GTTAGTTTGGA-ATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGAT 70949 || ||||| | || | || ||||| ||||||||||| | || ||||| ||| || Sbjct 22616 GTGAGTTTACTGACAG-TCGGGTCGGCAATGTGAATATTAAGTGATTGACTCTGACAAAT 22674 Query 70950 GAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGT 71009 | | ||||| | || |||||||| | | |||| |||||| |||||||||| || Sbjct 22675 GTACGCTCCTCGATCGGCAGCCATGTCCAAAATCGCCTTTTGCTTGATTTCCCAAACTGT 22734 Query 71010 TTTATA 71015 ||| || Sbjct 22735 TTTGTA 22740 >seq835 Length=76541 Score = 237 bits (262), Expect = 2e-57 Identities = 595/892 (67%), Gaps = 23/892 (3%) Strand=Plus/Plus Query 41780 TATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTCCATG 41839 ||||| || || ||||| || ||||| || || ||||||| || ||||| | ||||| Sbjct 29506 TATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGATATCATATCCATC 29565 Query 41840 AAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTA 41899 | ||||| ||||| | | | | ||| | || | | || | | || | ||||| | Sbjct 29566 CAGTCAAAGGGATTAGAAGCTTGATATAACTTGCTGACGCCAAGTGCATGTAACAATCGA 29625 Query 41900 TCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACT 41959 || || | || || || ||| ||||| |||||||||| || || | ||| Sbjct 29626 TCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGACT 29685 Query 41960 GGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTT 42019 ||||| | | | |||||||||||| || || ||||| | || || | Sbjct 29686 GGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAATGATTGCATGA 29745 Query 42020 ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAA---CATCAAACATGCGAAATCG 42076 | | |||| || | | || |||| | ||||| |||||| || || Sbjct 29746 ATAGAGCCTTCT---GGAAGCTTATTTACCAGTTTCGAGTACATCAGACATGCAAAGTCA 29802 Query 42077 CAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGG 42136 || || || || ||||| | ||| || | || || ||||| ||||| ||||| | Sbjct 29803 CAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAAT 29862 Query 42137 CCACGCTTTTTAAGCCAAAATATAGACGCA-AATGATCCAGAAAAGAAGATTCCTTCTAC 42195 || || || || |||||||||||||| ||| |||||||| || || ||||||||||| || Sbjct 29863 CCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCGGAGAAAAAGATTCCTTCGAC 29921 Query 42196 TGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGTATC-CA-CTTTTGA 42253 ||||||||||| | | ||| ||| || | |||| | || ||| || | ||| | Sbjct 29922 GGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCA-TACTTTGGATCGCACCATTTCA 29980 Query 42254 --GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 42311 ||||| | || || || | || || || || ||||| || || | | || | Sbjct 29981 ACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCACAGTAAATGCT 30040 Query 42312 ttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAA 42371 ||||||| | |||||| | |||||||| ||||| | ||||| ||| || || | Sbjct 30041 GTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGTGTA 30100 Query 42372 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTT--C 42429 | ||||| || || || ||||||||||| || |||| || |||| | ||| || | | Sbjct 30101 TATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGAACCTCAC 30160 Query 42430 TGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGC 42489 || ||| || | || | |||||| || || ||||| |||||||||||||| || || Sbjct 30161 TGCTGAAATTCAT--GGCGAGATTTTCATTGACAATTCCATCACTGGCTGCAAAGAAGGC 30218 Query 42490 CAATACATGTTTTATAAAATATTTTTC---GTCCGGTGTTAATTTATTCCAATCATTGAT 42546 ||| || ||||| ||||| | | |||| |||| | || ||| ||| ||||| || Sbjct 30219 CAACACGTGTTTGATAAAGTGTCTTTCATTGTCC---GATATATTAAGCCAGTCATTCAT 30275 Query 42547 ATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACAT 42606 || | | ||| | ||||||| | |||||||| ||| ||||| || |||||||| Sbjct 30276 GTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTTATACAT 30335 Query 42607 ATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTATTTGGATTT 42658 | ||| || ||| | ||| || || || | ||||| | || |||||| Sbjct 30336 GTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGGTTCGGATTT 30387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671036767379600