Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_004813.1 Length=57930 Score E Sequences producing significant alignments: (Bits) Value seq3774 165 3e-36 seq1791 161 4e-35 >seq3774 Length=612 Score = 165 bits (182), Expect = 3e-36 Identities = 421/630 (67%), Gaps = 37/630 (6%) Strand=Plus/Plus Query 52288 ACTGAACCGCCCCGGGAATCCTGGAGACTAAACTCCCTGAGAAAGAGGTAAACAGGATGA 52347 |||||||||||||||| || ||||||| | || ||||| || | | ||||| Sbjct 2 ACTGAACCGCCCCGGGTTTCTCGGAGACTCCAATCTTTGAGAGGATGG--AGC--GATGA 57 Query 52348 CTAAAAATACTCGT--TTTTCCCCCGAAGTCCGTCAGCGGGCGATTCGTATGGTTCTGGA 52405 |||| ||| || | |||||| || |||||| ||||||| || | |||||| | || Sbjct 58 A-AAAACTAC-CGAAGTATTCCCCAGAGGTCCGTGAGCGGGCCATCAGGATGGTTTTCGA 115 Query 52406 AAGTCAGGATGAATATGACTCACAGTGGGCGGCAATTTGTTCCATTGCCCCAAAGATTGG 52465 | | ||| || || || |||||||| | || || |||||||||| ||||| || Sbjct 116 ACACCTTCCTGAGTACGAGTCGCAGTGGGCCACCATCAGTGCCATTGCCCCCAAGATCGG 175 Query 52466 CTGTACGCCGGAGACTCTGCGTGTCTGGGTTCGCCAGCATGAGCGGGATACCGGGGGCGG 52525 ||| ||||| ||||| | | | ||||||||||| |||||| | | ||| | Sbjct 176 CTGCACGCCCGAGACATTAAGGCTGTGGGTTCGCCAATCTGAGCGCAACAGCGGCCAGCG 235 Query 52526 TGATGGAGGGCTCACCACCGCTGAACGTCAGCGTCTGAAAGAGCTGGAGCGTGAAAATCG 52585 |||| ||||| | ||| | |||||| |||| | || | |||||||||| || || Sbjct 236 TGAT---GGGCTGAGCACAGTCGAACGTGAGCGAGTCAAGCTGTTGGAGCGTGAGAACCG 292 Query 52586 TGAACTGCGCCGCAGTAACGATATCCTTCGCCAGGCTTCCGCTTATTTTGCGAAGGCGGA 52645 | | |||| | |||||| || | || |||| ||||| |||||||| ||||||| Sbjct 293 TCAGTTGCGTCAAGCTAACGAGATATTGCGTAAGGCCTCCGCCTATTTTGCCCAGGCGGA 352 Query 52646 GTTCGACCGCCTCTGGAAAAAATGATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGG 52705 | ||||||||| | ||| |||| | | | | ||| | || || |||||| Sbjct 353 GCTCGACCGCCCATTCAAACGATGAAGACGTTTATTGATGAAAACCGCCAGTCCTACGGG 412 Query 52706 GTCGGACCGCTATGCAGCGAACTGCATATTGCCCCGTCAACGTATTAC-----CACTG-T 52759 |||| ||| | |||| | ||| || |||||||| ||||| ||| | ||| | Sbjct 413 GTCGAGCCGATTTGCAAGGTGTTGCCAATCGCCCCGTCGACGTACTACCGGTACGCTGCT 472 Query 52760 CAGCAACAGC-GACATCATCCGGATAAACGCAGT--GCCCGTGCGCAGCGCGA----TGA 52812 ||||| || ||| || || ||||| || |||||||| || || | Sbjct 473 CAGCA--GGCTGACCCCAGCC-------AGCAGTCAGCGCGTGCGCAACGTGACCAGGAA 523 Query 52813 CTGGCTGAAGAAAGAGATACAGCGCGTATACGATGAAAATCACAAGGTATACGGTGTGCG 52872 |||| || | | || ||||| || | ||||| | | ||||||| || ||||| Sbjct 524 CTGGGTG----AGCACATCCAGCGAGTCTGGGATGAGCACTTCCAGGTATATGGCGTGCG 579 Query 52873 TAAAGTCTGGCGTCAGTTGTTACGGGAAGG 52902 || |||||||| |||||| | || ||||| Sbjct 580 CAAGGTCTGGCGACAGTTGCTGCGTGAAGG 609 Score = 147 bits (162), Expect = 8e-31 Identities = 368/552 (67%), Gaps = 29/552 (5%) Strand=Plus/Plus Query 49524 TTCCCCCGAAGTCCGTCAGCGGGCGATTCGTATGGTTCTGGAAAGTCAGGATGAATATGA 49583 |||||| || |||||| ||||||| || | |||||| | ||| | ||| || || Sbjct 74 TTCCCCAGAGGTCCGTGAGCGGGCCATCAGGATGGTTTTCGAACACCTTCCTGAGTACGA 133 Query 49584 CTCACAGTGGGCGGCAATTTGTTCCATTGCCCCAAAGATTGGCTGTACGCCGGAGACTCT 49643 || |||||||| | || || |||||||||| ||||| ||||| ||||| ||||| | Sbjct 134 GTCGCAGTGGGCCACCATCAGTGCCATTGCCCCCAAGATCGGCTGCACGCCCGAGACATT 193 Query 49644 GCGTGTCTGGGTTCGCCAGCATGAGCGGGATACCGGGGGCGGTGATGGTGGGCTCACCAG 49703 | | ||||||||||| ||||| | || | || | | | || |||||| | || Sbjct 194 AAGGCTGTGGGTTCGCCAATCTGAGC--GCAACAGCGGCCAGCG-TGATGGGCTGAGCAC 250 Query 49704 CGCTGAACGTCAGCGTCTGAAAGAGCTGGAACGTGAAAATCGTGAACTGCGCCGCAGTAA 49763 | |||||| |||| | || | |||| ||||| || ||| | |||| | ||| Sbjct 251 AGTCGAACGTGAGCGAGTCAAGCTGTTGGAGCGTGAGAACCGTCAGTTGCGTCAAGCTAA 310 Query 49764 CGATATCCTTCGCCAGGCTTCCGCTTATTTTGCGAAGGCGGAGTTCGACCGCCTCTGGAA 49823 ||| || | || |||| ||||| |||||||| |||||||| ||||||||| | || Sbjct 311 CGAGATATTGCGTAAGGCCTCCGCCTATTTTGCCCAGGCGGAGCTCGACCGCCCATTCAA 370 Query 49824 AAAATGATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCGGACCGGTATGCAGC 49883 | |||| | | | | ||| | || || |||||||||| ||| | |||| Sbjct 371 ACGATGAAGACGTTTATTGATGAAAACCGCCAGTCCTACGGGGTCGAGCCGATTTGCAAG 430 Query 49884 GAACTGCATATTGCCCCGTCAACGTATTACC------ATTGTCAGCAACAGC-GACATCA 49936 | ||| || |||||||| ||||| |||| | |||||| || ||| || Sbjct 431 GTGTTGCCAATCGCCCCGTCGACGTACTACCGGTACGCTGCTCAGCA--GGCTGACCCCA 488 Query 49937 TCCGGATAAACGCAGT--GCCCGTGCGCAGC---ACGATG-ACTGGCTGAAGAAAGAGAT 49990 || ||||| || |||||||| | || | | ||||| || | | || Sbjct 489 GCC-------AGCAGTCAGCGCGTGCGCAACGTGACCAGGAACTGGGTG----AGCACAT 537 Query 49991 ACAGCGCGTATACGATGAAAATCACCAGGTATACGGTGTGCGTAAAGTCTGGCGTCAGTT 50050 ||||| || | ||||| | ||||||||| || ||||| || |||||||| ||||| Sbjct 538 CCAGCGAGTCTGGGATGAGCACTTCCAGGTATATGGCGTGCGCAAGGTCTGGCGACAGTT 597 Query 50051 GTTACGGGAAGG 50062 | | || ||||| Sbjct 598 GCTGCGTGAAGG 609 >seq1791 Length=616 Score = 161 bits (178), Expect = 4e-35 Identities = 337/499 (68%), Gaps = 11/499 (2%) Strand=Plus/Plus Query 50184 GTAAACCGTCAGTTCGTGGCAGAACGTCCAGACCAGTTGTGGGTGGCTGATTTTACCTGG 50243 || ||||||||||| ||||| || | || || | ||||| | || ||||||| Sbjct 35 GTCAACCGTCAGTTTGTGGCTGAGTGCCCGAACGCCCTATGGGTATCGGACTTTACCTAC 94 Query 50244 GTAAGCACATGGCAGGGCTTCGTTTATGTGGCGTTCATCATTGATGTGTTCGCCGGATAC 50303 || || || |||||||| || ||||| ||||| |||||||||||||| || ||| ||| | Sbjct 95 GTCAGTACCTGGCAGGGTTTTGTTTACGTGGCCTTCATCATTGATGTCTTTGCCCGATTC 154 Query 50304 ATCGTGGGATGGCAGGTCTCATCATCCATGGAAACAACATTCGTGCTGGATGCACTGGAG 50363 ||||| || ||| |||| || || | || || || || |||||||||||| Sbjct 155 ATCGTCGGTTGGAAGGTGTCCAGTTCAGCGCGTACCGATTTTGTACTCGATGCACTGGAG 214 Query 50364 CAGGCGTTGTGGGCCCGTCGGCC-GTCCGGCA--------CAATCCATCACAGTGATAAA 50414 || || | | |||||||| || ||| ||| || || |||||||| Sbjct 215 CAAGCCCTTTACGCCCGTCGCCCAGTCAAGCAGGGTGGACTCATTCACCACAGTGACCGT 274 Query 50415 GGTTCTCAGTATGTATCGCTGGCCTACACGCAGCGGCTTAAGGAAGCCGGATTACTGGCA 50474 || ||||| || || | ||| || |||| ||| |||||||| | | || Sbjct 275 GGCGTGCAGTACGTGTCAATTCGCTATACCGAGCGTCTTGTCGAAGCCGGTATTGAGCCA 334 Query 50475 TCAACAGGGAGTACTGGCGACTCGTATGACAACGCGATGGCTGAGAGCATCAATGGTCTT 50534 || |||||| || ||||| || ||||| || ||||||||| ||||||||||||| Sbjct 335 TCGGTCGGGAGTGTCGGTGACTCTTACGACAATGCCTTGGCTGAGACCATCAATGGTCTT 394 Query 50535 TACAAAGCGGAGGTAATACACCGTAAGAGC-TGGAAAAACCGGACAGAAGTGGAACTGGC 50593 ||||| || || || || || || | | | ||| | ||| | ||||| |||| Sbjct 395 TACAAGGCTGAAGTGATTCATCG-ACGCTCTTGGCCCACACGGGGGGCGGTGGAGCTGGA 453 Query 50594 CACACTAACGTGGGTGGACTGGTATAACAATCGACGATTGCTGGAAAGGCTGGGCCATAT 50653 || || | ||||||||||||| || | || || ||||||| | || ||||| Sbjct 454 AACGCTGAAATGGGTGGACTGGTTCAATCACCGCCGCCTGCTGGAGCCAATCGGTCATAT 513 Query 50654 TCCTCCGGCAGAAGCAGAA 50672 ||| |||| || |||||| Sbjct 514 TCCACCGGTCGAGGCAGAA 532 Score = 159 bits (176), Expect = 1e-34 Identities = 352/521 (68%), Gaps = 15/521 (3%) Strand=Plus/Plus Query 53003 GCCGTTGCCGCAGGCGACCGCGTAAACCGTCAGTTCGTGGCAGAACGACCTGACCAGCTG 53062 ||||| ||||||| | | || ||||||||||| ||||| || | || || || Sbjct 16 GCCGTGCCCGCAGG--ATCATGTCAACCGTCAGTTTGTGGCTGAGTGCCCGAACGCCCTA 73 Query 53063 TGGGTGGCTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTCATC 53122 ||||| | || ||||| |||||||| || |||||||| || || || ||||| |||||| Sbjct 74 TGGGTATCGGACTTTACCTACGTCAGTACCTGGCAGGGTTTTGTTTACGTGGCCTTCATC 133 Query 53123 ATTGATGTGTTTGCCGGATACATTGTGGGGTGGCGGGTCTCATCGTCCATGGAG-ACGAC 53181 |||||||| |||||| ||| ||| || || ||| ||| || || || | | || Sbjct 134 ATTGATGTCTTTGCCCGATTCATCGTCGGTTGGAAGGTGTC-CAGTTCAGCGCGTACCGA 192 Query 53182 ATTCGTGCTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCGACC-GTCCGGCACGG--- 53237 || || || |||||||||||||| || | | |||||||| || ||| ||| || Sbjct 193 TTTTGTACTCGATGCACTGGAGCAAGCCCTTTACGCCCGTCGCCCAGTCAAGCAGGGTGG 252 Query 53238 -----TCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCT 53292 | || |||||||| || ||||| || || | ||| || |||| || Sbjct 253 ACTCATTCACCACAGTGACCGTGGCGTGCAGTACGTGTCAATTCGCTATACCGAGCGTCT 312 Query 53293 TAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGAT 53352 | |||||||| | | |||| || ||| || ||||| || ||||| || | Sbjct 313 TGTCGAAGCCGGTATTGAGCCATCGGTCGGGAGTGTCGGTGACTCTTACGACAATGCCTT 372 Query 53353 GGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAGC-TGGAAAA 53411 ||| |||| |||||||||||||||||| || || || || || || | | | ||| | Sbjct 373 GGCTGAGACCATCAATGGTCTTTACAAGGCTGAAGTGATTCATCG-ACGCTCTTGGCCCA 431 Query 53412 ACCGTGCAGAAGTGGAACTGGCCACACTCACGTGGGTGGACTGGTATAACAATCGACGAT 53471 || | | ||||| |||| || || | ||||||||||||| || | || || Sbjct 432 CACGGGGGGCGGTGGAGCTGGAAACGCTGAAATGGGTGGACTGGTTCAATCACCGCCGCC 491 Query 53472 TGCTGGAAAGGCTGGGCCACACTCCTCCGGCAGAAGCAGAA 53512 ||||||| | || || | ||| |||| || |||||| Sbjct 492 TGCTGGAGCCAATCGGTCATATTCCACCGGTCGAGGCAGAA 532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185227539269840