Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_004914.3 Length=62706 Score E Sequences producing significant alignments: (Bits) Value seq1791 181 4e-41 seq3774 141 4e-29 >seq1791 Length=616 Score = 181 bits (200), Expect = 4e-41 Identities = 359/523 (69%), Gaps = 19/523 (4%) Strand=Plus/Minus Query 56324 TTCTGCTTCTGCCGGAGGAGTATGGCCCA--GCCTTCCCAGCAATCGTCGATTGTTATAC 56381 |||||| || |||| ||| |||| || | | || |||||| || || | || || Sbjct 532 TTCTGCCTCGACCGGTGGAATATGACCGATTGGCT--CCAGCAGGCGGCGGTGATTGAAC 475 Query 56382 CAGTCCACCCACGTTAGTGTGGCCAGTTCCACTTCTGCACGGTTTTTCCA-GCTCTTACG 56440 ||||||||||| | || || |||| ||||| | | || | ||| | | | || Sbjct 474 CAGTCCACCCATTTCAGCGTTTCCAGCTCCACCGCCCCCCGTGTGGGCCAAGAGCGT-CG 416 Query 56441 GTGTATTACCTCCGCTTTGTAAAGACCATTGATGCTCTCAGCCATCGCGTTGTCATACGA 56500 || || || || || |||||||||||||||||| ||||||||| || ||||| || || Sbjct 415 ATGAATCACTTCAGCCTTGTAAAGACCATTGATGGTCTCAGCCAAGGCATTGTCGTAAGA 356 Query 56501 GTCGCCTGTACTCCCTGTTGATGCCAGTAATCCGGCTTCTTTTAGTCGCTCCGTATAGGC 56560 ||| || |||||| |||| | | |||||||| || ||||| |||||| Sbjct 355 GTCACCGACACTCCCGACCGATGGCTCAATACCGGCTTCGACAAGACGCTCGGTATAGCG 296 Query 56561 CAGTGACACATACTGAGAGCCTTTATCGCTGTGATGGATGGTGCCA--------GAC-GG 56611 | |||||| ||||| ||| || ||||| || ||| ||| ||| || Sbjct 295 AATTGACACGTACTGCACGCCACGGTCACTGTGGTGAATGAGTCCACCCTGCTTGACTGG 236 Query 56612 ACGACGGGCCCACAACGCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTC-CATAGACG 56670 |||||||| | | || |||||||| ||||| || || || ||| | | | || Sbjct 235 GCGACGGGCGTAAAGGGCTTGCTCCAGTGCATCGAGTACAAAA-TCGGTACGCGCTGAAC 177 Query 56671 ATGAGACCCGCCACCCCACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGA 56730 || ||| ||| || |||||| ||| |||||| ||||||||||| || ||||| || | Sbjct 176 TGGACACCTTCCAACCGACGATGAATCGGGCAAAGACATCAATGATGAAGGCCACGTAAA 117 Query 56731 CGAAGCCCTGCCATGTGCTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTT 56790 | || |||||||| || |||||||| ||||| || | ||||| || || || | | Sbjct 116 CAAAACCCTGCCAGGTACTGACGTAGGTAAAGTCCGATACCCATAGGGCGTTCGGGCACT 57 Query 56791 CTGCCACGAACTGACGGTTTACGCGGTCGCCTGCGGCAACGGC 56833 | ||||| ||||||||||| || | | ||||||| ||||| Sbjct 56 CAGCCACAAACTGACGGTTGACATGAT--CCTGCGGGCACGGC 16 >seq3774 Length=612 Score = 141 bits (156), Expect = 4e-29 Identities = 365/549 (66%), Gaps = 23/549 (4%) Strand=Plus/Minus Query 56934 CCTTCCCGTAACAACTGACGCCAGACTTTACGCACACCGTACACCTGATGATTTTCATCG 56993 ||||| || | |||||| |||||||| || ||||| || || ||||| | ||||| Sbjct 609 CCTTCACGCAGCAACTGTCGCCAGACCTTGCGCACGCCATATACCTGGAAGTGCTCATCC 550 Query 56994 TATACGCGCTGTATCT-CTCTCTTCAGCCAGTCGTCGTGCTGCGCACGGGC--ACTGCGT 57050 | || ||||| || | ||| | ||| | ||| | |||||||| || ||||| Sbjct 549 CAGACTCGCTGGATGTGCTCACC-CAGTTCCTGGTCACGTTGCGCACGCGCTGACTGCT- 492 Query 57051 TTATCCGGATGATGTC-GCTGTTGCTGACAAT------GGTAATACGTTGACGGGGCAAT 57103 || || ||| || |||||| | |||| ||||| |||||||| || Sbjct 491 ------GGCTGGGGTCAGCC--TGCTGAGCAGCGTACCGGTAGTACGTCGACGGGGCGAT 440 Query 57104 ATGCAGTTCGCTGCATACCGGTCCGACCCCGTACTGCTCACGCAGCTTATCCAGCAGTGG 57163 ||| | |||| | ||| |||||||||| || || | ||| | | | Sbjct 439 TGGCAACACCTTGCAAATCGGCTCGACCCCGTAGGACTGGCGGTTTTCATCAATAAACGT 380 Query 57164 CATCATTTTTTCCAGAGGCGGTCGAACTCCGCCTTCGCAAAATAAGCGGAAGCCTGGCGA 57223 | |||| ||| | ||||||||| |||||||| |||||||| ||||| |||| || Sbjct 379 CTTCATCGTTTGAATGGGCGGTCGAGCTCCGCCTGGGCAAAATAGGCGGAGGCCTTACGC 320 Query 57224 AGGATATCGTTACTGCGGCGCAGTTCACGATTTTCACGTTCCAGCTCTTTCAGACGCTGA 57283 | || |||||| | |||| | ||| || ||||| |||| | || | |||| | Sbjct 319 AATATCTCGTTAGCTTGACGCAACTGACGGTTCTCACGCTCCAACAGCTTGACTCGCTCA 260 Query 57284 CGTTCAGCGCTGGTGAGCCCACCATCACCGCCCCCGGTATCCCGCTCATGCTGGCGAACC 57343 ||||| | || | |||||| || | | | || | || | ||||| ||||||||| Sbjct 259 CGTTCGACTGTGCTCAGCCCATCA-CGCTGGCCGCTGTTGC--GCTCAGATTGGCGAACC 203 Query 57344 CAGACACGCAGAGTCTCCGGCGTACAGCCAATCTTTGGGGCAATGGAACAAATTGCCGCC 57403 || | | | ||||| ||||| ||||| ||||| |||||||||| || || | ||| Sbjct 202 CACAGCCTTAATGTCTCGGGCGTGCAGCCGATCTTGGGGGCAATGGCACTGATGGTGGCC 143 Query 57404 CACTGTGAGTCATATTCATCCTGACTTTCCAGAACCATACGAATCGCCCGCTGACGGACT 57463 ||||| || || || ||| | ||| | |||||| | || ||||||| |||||| Sbjct 142 CACTGCGACTCGTACTCAGGAAGGTGTTCGAAAACCATCCTGATGGCCCGCTCACGGACC 83 Query 57464 TCGGGGGAA 57472 || |||||| Sbjct 82 TCTGGGGAA 74 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200504558601270