Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq365 149 1e-31 seq6860 132 8e-27 >seq365 Length=109985 Score = 149 bits (164), Expect = 1e-31 Identities = 199/276 (72%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||| | | |||||| || |||||||||||||||||||| ||||| || Sbjct 50878 GCAAAGCGTCATCGTAAAGTTCTTCGTGACAACATCCAAGGAATCACCAAACCAGCCATT 50937 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| ||||||||||| || || || ||| || || | |||| ||||| | Sbjct 50938 CGTCGTCTTGCTCGTCGTGGAGGTGTTAAACGTATCAGCGGTCTTATCTACGAAGAAACA 50997 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | |||| | || | ||| | | | ||||| | ||| | | || || ||| Sbjct 50998 CGAGGTGTTCTCAAAGTGTTCTTGGAAAATGTTATTCGCGATTCCGTAACTTACACAGAG 51057 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||| | |||||||| || | |||||| | ||||| ||| | ||||||||||| Sbjct 51058 CACGCTCGTAGAAAGACTGTAACAGCAATGGATGTGGTCTACGCACTTAAACGTCAAGGA 51117 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTA---ATCTTCT 16705 |||| | |||||||| || |||| ||||||| Sbjct 51118 CGTACACTATATGGTTTCGGTGGTTAGATATCTTCT 51153 >seq6860 Length=68555 Score = 132 bits (146), Expect = 8e-27 Identities = 186/261 (71%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| || |||||||| | | || || |||||||||||||| ||||| ||||| ||||| Sbjct 12730 CGCCAAACGTCATCGTAAAGTACTGCGCGATAACATCCAAGGTATCACAAAGCCCGCTAT 12789 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| ||||||||||| || || ||||| || || || |||| ||||| | Sbjct 12790 CCGTCGTCTTGCTCGTCGTGGAGGTGTAAAGCGAATCAGCGGTCTGATCTACGAAGAAAC 12849 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | || | ||||| | | || |||| ||| | | || ||||| Sbjct 12850 ACGTGGAGTTCTCAAAGTATTCCTTGAAAATGTCATCCGTGACTCAGTAACATACACCGA 12909 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || | || || || || | |||||| |||| ||||| ||||||||||||| Sbjct 12910 GCATGCGCGCAGAAAAACAGTGACAGCAATGGATGTCGTATATGCTCTGAAACGTCAAGG 12969 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 | | | | || |||||||| Sbjct 12970 CAGAACCCTCTACGGTTTTGG 12990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79064036311530