Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq500 279 1e-69 seq4418 161 3e-34 seq835 100 7e-16 seq2578 84.2 6e-11 >seq500 Length=28399 Score = 279 bits (308), Expect = 1e-69 Identities = 812/1224 (66%), Gaps = 35/1224 (3%) Strand=Plus/Minus Query 363387 TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGT 363446 |||||| || | ||| || |||||||||| || || | ||| | ||||| | | ||| Sbjct 24345 TATTTT-GGCTTTAAAACTCTGGAGAAATCGTATCTGTTGCGTGTGAATGGAAA-AGTGT 24288 Query 363447 -TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTG 363505 ||||||||| || |||||| ||||||| || ||| | || || || | || | | Sbjct 24287 GTGAACGCCCACAACATATGATAATGCGAGTGGCTGTCGGCATACACAAAGAGAATTTGG 24228 Query 363506 ATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTC----GTGTATTCACGCACGCCACG 363561 |||||| | ||||| ||| | | | || | | || | || ||||| || || Sbjct 24227 ATGCCGTTTTGGAAACGTATGAACACAT--GT-CACAAAAGT-TCTTTACGCATGCAACT 24172 Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621 || || | | |||||| ||||| | | || || | || || || ||||| || Sbjct 24171 CCGACGCTTTTCAATGCGGGAACGCCTCGACCTCAATTATCGTCGTGTTTTCTATTATCC 24112 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||| | || ||||| ||||| || || | ||||| || || | ||||| |||||| Sbjct 24111 ATGCAAGATGATTCTATCGACGGCATTTACGACACGCTGAAACAATGTGCGTGTATTTCA 24052 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCG-TGCACAGAACAGTTACAT 363740 ||| || ||||| ||||| || || |||| |||| | ||| |||||||| || Sbjct 24051 AAGTGGGCTGGCGGTATTGGCGTCAGTATTTCCAATATTCGCTCCACC-AACAGTTATAT 23993 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 |||||| || ||| |||||||| | ||||| |||||||| ||||| | | || Sbjct 23992 TCGCGGGACGAATGGAAGTTCGAATGGAATTGTTCCAATGCTTCGGGTGTTCAATGACAC 23933 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGA 363860 || | ||||| || || ||||| || ||||| |||||| | ||||| || ||||| || Sbjct 23932 AGCTCGATACGTTGATCAAGGTGGTGGGAAGCGGAAAGGGTCTTTTGCAATTTATCTAGA 23873 Query 363861 GCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGA 363920 ||| ||||| ||||| ||||||||||| || || || || || ||||| || Sbjct 23872 GCCCTGGCATGCGGATATCTTTGAGTTTCTGGAACTACGTAAGAATCATGGAAATGAACT 23813 Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980 || || || ||| |||| ||||| |||||| | | || | |||||||| || || Sbjct 23812 CCATCGAGCTCGAGATTTGTTTTATGCTCTTTGGATCCCCGATCTGTTTATGAAACGTGT 23753 Query 363981 GG-AGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATG 364039 || || || ||||| ||| | || || || |||| |||| | |||| || Sbjct 23752 GGAAGACAACCAAGAA-TGGAGTTTATTCTGTCCGAACGAGGCTCCACGACTTTATGAGA 23694 Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTA 364099 |||||| ||| | || ||| |||| |||||||| || || | | || || | Sbjct 23693 CATGGGGAAGCGAATTTGATGCGTTATATGAAAAGTACGAGTCTCAAAACATTGCCCGAA 23634 Query 364100 AGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAA 364159 |||| | || ||| | | ||||||||||| ||||| ||||||||||| |||| Sbjct 23633 AGACTGTCAAAGCCCAGCAATTGTGGTTTGCCATTTTGGATAGTCAGATTGAGACCGGAA 23574 Query 364160 CACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTA 364219 | || |||||| | |||||||| | || || || || ||||| |||||| | ||||| | Sbjct 23573 CGCCGTATATGCTTTACAAAGACGCTTGTAATCGTAAATCCAATCAGCAGAATCTTGGAA 23514 Query 364220 CAATTC-AGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACT 364278 | |||| | || ||||| || || || || || || ||| | | || | || Sbjct 23513 CCATTCGATCA-AGCAATCTCTGCTGTGAAATCATCGAGTACTCAGACTCCAAAGAAGTG 23455 Query 364279 GCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTT--TGTAAAAGATGGTACTTTTG 364336 || ||||| || | || || ||||| | | || |||| ||| | | || Sbjct 23454 GCAGTATGCAATTTGGCTTCCATCGCATTGTCAAAATTTGTGTATCAGAAAGAATTT--- 23398 Query 364337 ACCACCAGCATCTTTATGACGTAA--CCTATCAT-GCTACTTGCAATCTCGACAAGGTTA 364393 | ||| |||| ||| || | | || | ||| |||||| |||| | | Sbjct 23397 -CAGTTTGCAAAATTAT-ACGAAATCACAAAAATCGTTACGAAAAATCTCAACAAAATCA 23340 Query 364394 TCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCCCG 364452 | || ||||||||||| ||||||||||| | || | | ||| ||| ||||| ||| Sbjct 23339 TTGATCTCAATTATTATCCGATTCCTGAAGCACAAGTGAGC-AATCAGCGACATCGACCG 23281 Query 364453 ATTGGTCTTGGTGTACAGGGCCTCGCTG--ACGTTTTTA-TGATGCTCAAGATGGCATTT 364509 ||||| | || || || || || || | ||||||||| ||||| | | ||||| Sbjct 23280 ATTGGAATCGGCGTTCAAGGTCTTGCCGATACGTTTTTACTGATG---AGTCTTCCATTT 23224 Query 364510 GATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCA 364569 || | ||||| | || || || || || |||||||| |||||||| || || Sbjct 23223 GAAAGCAAAGCTGCTCGCGAGCTCAACAAAGAAATTTTTGAAACGATGTATTTCGCGGCG 23164 Query 364570 ATGACTGCTTCGTGTGATTTGGCA 364593 ||| ||||| || |||||| Sbjct 23163 ATGGAAGCTTCCATGGAATTGGCA 23140 >seq4418 Length=20304 Score = 161 bits (178), Expect = 3e-34 Identities = 283/406 (70%), Gaps = 6/406 (1%) Strand=Plus/Plus Query 111485 AGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAA 111544 |||||| ||| | |||||| | ||||| ||||||||||| || || |||||| |||| Sbjct 17405 AGAAGGCGATTTAGGACCAATCTACGGCTTTCAATGGCGTCATTTCGGTGCAAGTTACAC 17464 Query 111545 AACCATGCA--CGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGAT 111602 | ||||| || | | | | | ||||| ||||||| | |||| || | Sbjct 17465 AGATATGCATGCGGATTACA-GCGGC-CAGGGCTTTGATCAACTCGCCGATGTGATACA- 17521 Query 111603 CAAATTAAGAACA-ACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGC 111661 |||| | | ||| ||| || || ||| || || || | || ||||| |||| | Sbjct 17522 CAAACTCAAAACTGACCAAAATTGTCGACGTATCATCTTATCCGCTTGGAATCCAACCGA 17581 Query 111662 ATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGG 111721 || | |||||||| | || || |||||||| |||||||| ||||| || | || Sbjct 17582 TTTAGCCGAAATGGCATTACCTCCCTGTCATCTGATGTGCCAATTTTACGTTGCAAATGG 17641 Query 111722 GATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAA 111781 | | |||||||||||||| |||||||| |||||||||||||| || ||||| ||||| Sbjct 17642 GGAATTATCATGCCAAATGTACCAGCGATCCGCTGATATTGGTCTGGGCGTTCCATTTAA 17701 Query 111782 TATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACCGGG 111841 |||||| || ||||| || | || | || || || | || ||||| |||| || Sbjct 17702 TATTGCTAGCTACGCGCTTTTGACAAAAATGATTGCACACGTGACTGATCTCCAACCCGG 17761 Query 111842 TGAATTCATTCACGTTATCGGAGATGCGCATGTTTACACAAACCAC 111887 || || |||| || ||||||||||| ||| | |||| || ||| Sbjct 17762 CGAGTTTGTTCATGTGATCGGAGATGCCCATATCTACATGAATCAC 17807 >seq835 Length=76541 Score = 100 bits (110), Expect = 7e-16 Identities = 492/771 (64%), Gaps = 18/771 (2%) Strand=Plus/Minus Query 22186 GAAAACGAACAACATTTTATCAAATATATTCTAGCATTCTTTGCTACCGCAGACGGTATA 22245 || || ||| ||| ||||||||| | | | || |||||||| || || || || Sbjct 30251 GACAATGAAAGACACTTTATCAAACACGTGTTGGCCTTCTTTGCAGCCAGTGATGGAATT 30192 Query 22246 GTTTTTGAGAATCTAGTGACTAATTTT-GCATCTGAAATTCAATACCCAGAGGCCAGATG 22304 || ||| ||||| | | ||||| ||| ||| |||| ||| || || |||| Sbjct 30191 GTCAATGAAAATCTCGCCATGAATTTCAGCAG-TGAGGTTCAGATCCCCGAAGCTCGATG 30133 Query 22305 TTTCTATGGTGTGCAAATGATGATTGAAAATGTTCACGCGGAAACATATTC--TAT-GAT 22361 || || || | ||||| || |||||| | ||| ||||| ||||| ||| ||| Sbjct 30132 CTTTTACGGATTTCAAATTGCAATAGAAAATATACACTCGGAAGTGTATTCGTTATTGAT 30073 Query 22362 -GCTACAGTCACTCGTAGAAGATAAAGACGAACAACGAAACTTATTCCGCGCGATTCGCA 22420 | |||| || | ||||| | ||| ||| | ||| | |||||||| | Sbjct 30072 TGATACATACA----TCAAAGATCCAACTGAAAAACAGCATTTACTGTGCGCGATTGAAA 30017 Query 22421 CCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAA--CAATGAACG 22478 | || | | ||| ||||| ||| | |||||| |||||||| | ||| | | | Sbjct 30016 CAATCCCGTGCGTTACCAATAAAGCACAATGGGCGTTGAAATGGTGCGATCCAAAGTATG 29957 Query 22479 T-TCATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAG 22537 || || || ||| | | | || ||||| | || ||||| || || || || ||| Sbjct 29956 CCTCGTTTGCAGAAAGAGTGGTAGCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGAT 29897 Query 22538 CATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAA 22597 |||| || | || |||||||| || ||||| | | | ||||| || || ||||||| Sbjct 29896 CATTCTGCTCTATATTTTGGCTGAAGAAACGAGGATTGATGCCTGGACTTTGCTTTTCAA 29837 Query 22598 ATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGA 22657 ||||| | || || || ||||| || || ||| || ||||| ||| || | || || Sbjct 29836 ATGAGCTCATCAGTCGTGATGAAGGACTACATTGTGACTTTGCATGTCTGATGTACTCGA 29777 Query 22658 ATCATATCATTCATAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTG 22717 | | | | |||| |||||| | | || | | || || ||| | | || ||| Sbjct 29776 AAC---TGGTAAATAAGCTTCCAGAAGGCTCTATTCATGCAATCATTTCCGACGCCGTTA 29720 Query 22718 AACTTGAACGTCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCG 22777 | |||| |||| | | || | | ||||| || ||||| || ||| | Sbjct 29719 TCATCGAACAAGAATTTGTACGAGATTCACTTCCAGTCGAGCTAATTGGAATGAATTCAA 29660 Query 22778 AATCAATGAGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGG-TTAT 22836 | ||| || ||| || | ||||| || ||||| | ||| | |||| || | Sbjct 29659 GTTTGATGGGTCAATACATCGAGTTTGTGGCGGATCGATTGTTACATGCACTTGGCGTCA 29600 Query 22837 GCAAAGCATTATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGA 22896 || ||| ||| | | |||||| ||||| |||||||| | || || || ||||| Sbjct 29599 GC-AAGTTATATCAAGCTTCTAATCCCTTTGACTGGATGGATATGATATCTCTGCAAGGA 29541 Query 22897 AAGACCAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTT 22947 || || || || || || ||| | ||||| ||||| ||| | |||||| Sbjct 29540 AAAACAAACTTTTTTGAGAAACGCGTTGGAGAATATGCGAAATCTGGTGTT 29490 >seq2578 Length=36946 Score = 84.2 bits (92), Expect = 6e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 13067 GTCGTTCATTTCGTTTATCAAGCTCTTTCTTTTTCAAAACAGGTGGCTTTCCGTCAAAAA 13126 |||| || || || || || | |||||| |||||| ||| || || ||||||||||| | Sbjct 21250 GTCGATCTTTCCGCTTTTCCAACTCTTTGCTTTTCATAACGGGCGGTTTTCCGTCAAATA 21309 Query 13127 CATAGACGGGTTTAATTCCTGCTTCAATTAATCGAATGGTTCGGTAAAAAATACCTGTTA 13186 | || |||||||| || || ||| || | ||||| ||||| | || || ||| | Sbjct 21310 CGTAAACGGGTTTGATGCCATTTTCCATAAGACGAATCGTTCGCGAGAACATTCCTTGCA 21369 Query 13187 AATGTGAAGTCACTTCACCTT 13207 |||| ||||| |||| |||| Sbjct 21370 AATGAGAAGTATCTTCGCCTT 21390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303149702548220