Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq835 260 2e-64 seq500 212 8e-50 >seq835 Length=76541 Score = 260 bits (288), Expect = 2e-64 Identities = 608/906 (67%), Gaps = 17/906 (2%) Strand=Plus/Plus Query 32376 TATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATG 32435 ||||| || || ||||| || ||||| || ||||| |||| | ||||| | ||||| Sbjct 29506 TATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGATATCATATCCATC 29565 Query 32436 AAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTA 32495 | || || ||||| | | | | ||| | || | | || | | || | ||||| | Sbjct 29566 CAGTCAAAGGGATTAGAAGCTTGATATAACTTGCTGACGCCAAGTGCATGTAACAATCGA 29625 Query 32496 TCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACT 32555 || || ||||| || || ||| ||||| |||||||||| || || | ||| Sbjct 29626 TCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGACT 29685 Query 32556 GGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTT 32615 ||||| | | | |||||||||||| || || ||||| | || || | Sbjct 29686 GGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAATGATTGCATGA 29745 Query 32616 ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAA---CATCAAACATGCGAAATCG 32672 | | |||| || | | || |||| | ||||| |||||| || || Sbjct 29746 ATAGAGCCTTCT---GGAAGCTTATTTACCAGTTTCGAGTACATCAGACATGCAAAGTCA 29802 Query 32673 CAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGG 32732 || ||||| || || || | ||| || | || || ||||| ||||| ||||| | Sbjct 29803 CAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAAT 29862 Query 32733 CCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCAGAAAAGAAAATTCCTTCTAC 32791 || || || || ||||||||||| || ||| |||||||| || || || |||||||| || Sbjct 29863 CCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCGGAGAAAAAGATTCCTTCGAC 29921 Query 32792 TGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATC-CACT-TTTGA 32849 ||||||||||| | | ||| ||| || | ||| | || ||| ||| ||| | Sbjct 29922 GGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTT-TGGATCGCACCATTTCA 29980 Query 32850 --GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGt 32907 ||||| | || || || | || || || ||||| || || || | | || | Sbjct 29981 ACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCACAGTAAATGCT 30040 Query 32908 ttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAA 32967 ||||||| | |||||| | |||||||||||||| | ||||| |||||| || | Sbjct 30041 GTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGTGTA 30100 Query 32968 TGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTG 33027 | ||||| || || |||||||||||||| ||||||| ||| |||| ||||| || || Sbjct 30101 TATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGAACCTCAC 30160 Query 33028 TAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 33085 | | ||| || | || | ||||||||| || ||||| |||||||||||||| || || Sbjct 30161 TGCTGAAATTCATG--GCGAGATTTTCATTGACAATTCCATCACTGGCTGCAAAGAAGGC 30218 Query 33086 CAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATC 33145 ||| || ||||| ||||| | | |||| | | || ||| ||| ||||| || || Sbjct 30219 CAACACGTGTTTGATAAAGTGTCTTTCATTGTCCGATATATTAAGCCAGTCATTCATGTC 30278 Query 33146 TTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATT 33205 | | ||| | |||||| | |||||||| ||||||||| || |||||||| | Sbjct 30279 ATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTTATACATGTC 30338 Query 33206 CCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGAT 33265 ||| || ||| | ||| || ||||| | ||||| | || ||||||| | ||| | Sbjct 30339 CCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGGTTCGGATTTTCTCGAAGAAA 30398 Query 33266 TGGTTC 33271 ||||| Sbjct 30399 AGGTTC 30404 >seq500 Length=28399 Score = 212 bits (234), Expect = 8e-50 Identities = 1400/2241 (62%), Gaps = 38/2241 (2%) Strand=Plus/Plus Query 61880 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 61939 || || |||||||||||||| ||||| ||||| ||||| |||| |||||||| Sbjct 22556 GTTCGGAGATAGTACATTCCTGTTTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGAA 22615 Query 61940 GTTAGTTTGGAATAAC--TCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGA 61997 || ||||| | | || |||| || || || || ||||| | |||||||| ||| | Sbjct 22616 GTGAGTTT--ACTGACAGTCGGGTCGGCAATGTGAATATTAAGTGATTGACTCTGACAAA 22673 Query 61998 TGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAG 62057 || | ||||| | || |||||||| | | ||||| |||||| |||||||||| | Sbjct 22674 TGTACGCTCCTCGATCGGCAGCCATGTCCAAAATCGCCTTTTGCTTGATTTCCCAAACTG 22733 Query 62058 TTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCAT 62114 |||| || | || | || |||| | | |||| || | ||| || | || Sbjct 22734 TTTTGTACTTTTCTTTCACATGAGGCGGAATTTCAGCGATATTTTGTACGGAACCGCGAT 22793 Query 62115 CTGCCATAATCCTATTCTTGATCTCATCAT-TCCATAATTTTCTCTCGGTTAAAACTCTA 62173 | | || |||| | || | || |||| || || |||| | || |||| Sbjct 22794 CGCGAAGGATTTGATTCCGAACGTC-TGATGTCCACAAATTCATCTCAAT--AAGCTCTT 22850 Query 62174 --AGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATAT 62231 | ||||| || || | | ||||||||||| | || | ||| || | || | Sbjct 22851 CCATGAGATATTTGTTGACAATTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATGT 22910 Query 62232 TACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCG 62291 | || |||| || | |||||| ||| || | ||||||||| ||||| || || | Sbjct 22911 TGGAAGTGAACGGCTCGATAGACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTTG 22970 Query 62292 GCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAG 62351 |||| || || | || ||| |||| | |||| || | || ||||| | Sbjct 22971 GCATCGGAGCGAGCAGCAAAGAGTTTCGGATTCCGTGAGTAGCTACTTGCTCTTTCAACT 23030 Query 62352 GTTCCCAATTCCAAAGATCCGAC---GGTACAACNNNNNNNNNNNNNNNTTGTAGAATAC 62408 | | ||||| ||| || | || || | || ||| | |||| Sbjct 23031 GCTTCCAATCCCATCGACCGGAATCGGGAATGACCTGCCACATATCAAATTGAAAGATAC 23090 Query 62409 CGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCAC 62468 | ||| | ||||| |||| | ||||| ||||| | | || | ||| Sbjct 23091 CTCGACTAACTGGTGATCCAGCATAGCTCTCGTACGGTCCGAGTTCCCGTGCCAATTCCA 23150 Query 62469 AACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCG 62528 || || | || || |||| || ||||| || || | || || || || | | Sbjct 23151 TGGAAGCTTCCATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGCGAG 23210 Query 62529 CTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACAC 62588 | | ||| ||||||||| | | | || | ||||| || || | |||||||| | Sbjct 23211 CAGCTTTGCTTTCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGAACGC 23270 Query 62589 CAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAAT 62648 | || || || |||| ||||| || ||| | || ||||| ||||| |||||||||| Sbjct 23271 CGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGCTTCAGGAATCGGATAATAAT 23330 Query 62649 TAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGA 62708 | | ||| || ||||| ||||||||| | || | ||| | || | | ||| Sbjct 23331 TGAGATCAATGATTTTGTTGAGATTTTTCGTAACGATTTTTGTGATTTCGTATAATTTTG 23390 Query 62709 GAAAATCAAATCGCCCATCTATTACAAACATGTT--CAATGCAACAGATGCCAGATTACA 62766 ||| | |||| | ||| |||| | || || |||||| | || |||| ||| || Sbjct 23391 CAAACTGAAATT--CTTTCTGATACACAAATTTTGACAATGCGATGGAAGCCAAATTGCA 23448 Query 62767 AACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTT 62826 || || || || || | || | || | || || ||| ||| ||||| || | Sbjct 23449 TACTGCCACTTCTTTGGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTGCTTGATCG 23508 Query 62827 GATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 62886 |||||||| | ||| || ||||| || ||||| || || || ||||| || | Sbjct 23509 AATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAAAGCATATA 23568 Query 62887 TGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT-CGAGCCTTTA 62945 || || || || ||||||||| || | ||| || ||| | | | | | |||| Sbjct 23569 CGGCGTTCCGGTCTCAATCTGACTATCCAAAATGGCAAACCACA--ATTGCTGGGCTTTG 23626 Query 62946 TTATAGATTT---GTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGT 63002 | || || | | |||| ||||| | ||| || || || ||| Sbjct 23627 --ACAGTCTTTCGGGCAATGTTTTGAGACTCGTACTTTTCATATAACGCATCAAATTCGC 23684 Query 63003 CTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 63062 |||||| | | |||| ||| || | |||||| | || ||| ||| || Sbjct 23685 TTCCCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCATTCTTGGT 23744 Query 63063 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGG 63122 || | ||| ||||||||||| ||||| || ||||||||||| ||| | ||||| | Sbjct 23745 TGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAACAAATCTCGAG 23804 Query 63123 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63182 || ||| || ||||| |||||| || || || ||| | | ||||| | || Sbjct 23805 CTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATATCCGCAT 23864 Query 63183 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63242 |||| || || | || || || | | || ||| || || || ||||| | || Sbjct 23865 GCCAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCACCTTGATCAACGT 23924 Query 63243 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGG 63302 ||| ||| |||| ||| | || | | |||||||| ||| ||||| || | ||||| | Sbjct 23925 ATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTTCCATTCG 23984 Query 63303 TCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTG 63362 |||| ||||| || ||| |||||||| ||| | || || || || | Sbjct 23985 TCCCGCGAATATAACTGTTGGTGGAGCGAATATTGGAAATACTGACGCCAATACCGCCAG 24044 Query 63363 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCAT 63422 || || || || | || ||| |||| | ||| || || ||||| || ||| ||||| Sbjct 24045 CCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCAT 24104 Query 63423 CCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATA 63482 | |||| | ||||||||| || | ||| | ||| ||||||||||| || | Sbjct 24105 CTTGCATGGATAATAGAAAACACGACGATAATTGAGGTCGAGGCGTTCCCGCATTGAAAA 24164 Query 63483 AGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTG 63542 || |||| || || ||||| | |||| || | | | ||||| || | | | | Sbjct 24165 GCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCCAAAACGG 24224 Query 63543 AGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTT 63602 || | || | || || || || || || || ||||||| ||| || || || | || Sbjct 24225 CATCCAAATTCTCTTTGTGTATGCCGACAGCCACTCGCATTATCATATGTTGTGGGCGTT 24284 Query 63603 CAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAAT 63662 || | || || | ||||| || ||||| |||| ||||||||| ||||||| Sbjct 24285 CACACACTTTTCCATTCACACGCAACAGATACGATTTCTCCAGAGTTTTAAAGCCAAAAT 24344 Query 63663 AGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGT 63722 ||| ||| |||||||| || ||||| | || ||||| || || | | Sbjct 24345 AGTCGTAATCAAAGTCTCTATCACCGATAATGGCGGAATTGAGAGCTTCTTTGTTCTCCA 24404 Query 63723 TAACTACATCCATGGTAATACTTG--AAATAATAGGAAAATG---TTTCCCATTTTTAGG 63777 |||| | || ||| || ||| | |||| ||| | ||| ||| | Sbjct 24405 TAAC-AATTCGATGCACATCGTTGGCGATTAAT-GGAGCGGGTACTTTGGTGGTTTCGTG 24462 Query 63778 ATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTG 63837 || | || ||||| | || |||||| || | ||| ||||| | ||| || Sbjct 24463 CTTATTTTCGTAAAATAA---TTGAATGTTTTCACTGAAGACTTTGTTTGTATTTTTATG 24519 Query 63838 TAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACA 63897 || ||| || | || |||| ||| || | ||| |||| ||||||||||| | || Sbjct 24520 TAAATTGGAAATAGCAATTCGAGCAGCCAATTTGGAGAAATCGGGATGTTGTGTGCTGCA 24579 Query 63898 AGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATAT 63957 ||||| |||| ||||||| ||||||||| || || || || ||| | Sbjct 24580 GTAAGCTGCGGTTTCTGCTGCCAATTCGTCCAATTCCGATGTGGTGACGCCCGGATACAC 24639 Query 63958 TCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATA 64017 || || || ||| || ||||| | ||||| | | || ||||||||| || Sbjct 24640 GCCAGCAATCACTTTCTGAGATATTTGGACGGGATCAACGTATTCTGTGTTTAAGTTGTA 24699 Query 64018 ACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCATT 64077 || | |||| | || || | |||||||| || || |||| ||| || ||| | Sbjct 24700 GCAGAGTTTTGTGATTCGCGCAGTGATTTTGTCGAATTTGACGACTTCTTTTCGTCCGTC 24759 Query 64078 TCGTTTAATGACAAACATTTT 64098 ||||| |||||| ||||||| Sbjct 24760 ACGTTTGATGACATACATTTT 24780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633535291916000