Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq378 136 3e-27 seq2154 102 7e-17 seq7101 89.7 4e-13 >seq378 Length=86116 Score = 136 bits (150), Expect = 3e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| ||||| |||| || ||| | || || | |||||||| || || Sbjct 294 AATGCAAATTTTTGTTAAGACGCTGACTGGGAAAACTATTACGTTGGAAGTGGAATCTTC 353 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || |||||||| ||||| || ||| ||||||||||| ||||| || ||||| Sbjct 354 AGATACTATCGACAATGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCAGACCA 413 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || | ||||||||||| |||||| | ||||| | ||||| | | |||||||| Sbjct 414 GCAACGTCTAATTTTTGCCGGTAAACAACTGGAAGACGGACGCACGCTTGCGGATTACAA 473 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| ||||| || ||||| ||| | || || Sbjct 474 CATTCAGAAAGAGTCTACGCTTCATCTGGTACT 506 >seq2154 Length=27549 Score = 102 bits (112), Expect = 7e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 || |||||| || || || ||||| | ||||| ||| | ||||| | || || || || Sbjct 4080 AAGAATGCAGATTTTCGTCAAGACACTCACCGGGAAAACAATCACTCTTGAGGTCGAATC 4139 Query 25055 GTCTGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 || ||||| ||||| ||||| | || | ||| ||||| ||||| ||||| || | Sbjct 4140 ATCCGACACGATCGATAATGTGAAGGCGAAGATTCAA-GACAAGGAAGGAATTCCTCCCG 4198 Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173 |||||||||| | ||||| || || |||||||| || || | || || | | |||| Sbjct 4199 ACCAACAGCGTTTGATTTTCGCAGGAAAACAATTGGAGGACGGCCGAACGCTCGCGGATT 4258 Query 25174 ACAATATTCAAAAAG 25188 |||| || ||||||| Sbjct 4259 ACAACATCCAAAAAG 4273 >seq7101 Length=52731 Score = 89.7 bits (98), Expect = 4e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 ||| ||||| || ||||||||||| | |||||||| || |||||||| ||||||| ||| Sbjct 35658 AGGTATTCCCCCGGACCAACAGCGTCTCATTTTTGCTGGGAAACAATTGGAAGATGGTCG 35599 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 || | | |||||||| || || |||||| |||| ||||| | || ||| Sbjct 35598 AACATTAGCGGATTACAACATCCAGAAAGAAAGCACGTTACATCTGGTTCTA 35547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433263516731150