Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq7888 87.8 4e-12 seq726 87.8 4e-12 seq7469 86.0 1e-11 >seq7888 Length=285 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCACAT 142570 ||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||| Sbjct 54 TAGCTCAGTTGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGAGGGTTCGAGCCCCACGG 113 Query 142571 CGGGCA 142576 ||||| Sbjct 114 TGGGCA 119 >seq726 Length=155756 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCACAT 142570 ||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||| Sbjct 92 TAGCTCAGTTGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGAGGGTTCGAGCCCCACGG 151 Query 142571 CGGGCA 142576 ||||| Sbjct 152 TGGGCA 157 >seq7469 Length=86738 Score = 86.0 bits (94), Expect = 1e-11 Identities = 144/207 (70%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 279350 GGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTAC 279409 |||||| ||| | ||||| ||||| | || |||||||| | |||||| || ||| | Sbjct 61996 GGATCTATGTAATTGTGAGTTCTCTTTGGCGTATGGTGGTATGATTCTACTGAACAACGC 62055 Query 279410 CCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAA 279469 ||| | | ||| | || | || ||||||||| ||||| |||||| ||||| Sbjct 62056 CCGGTTGCGTTTGAAGAGAGGACATCGTTATGGTCTCTGTGGTCCAAATGGATGCGGTAA 62115 Query 279470 GAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTC---CTAACGCATC 279526 || || ||| | ||||| || ||||| || ||||||||||||| |||| | Sbjct 62116 ATCAACGCTGATGAGAGCCATCGCTAACGGCCAACTGGAAGGATTTCCGTCTAA---AGA 62172 Query 279527 TGAGGTAAGGACAGTGTATGTAGAGCA 279553 |||| ||| ||| |||| ||| || || Sbjct 62173 TGAGCTAAAGACTGTGTTTGTCGAACA 62199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027676004568610