Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq378 172 1e-37 seq2154 159 6e-34 seq251 136 7e-27 seq3650 114 2e-20 seq3863 107 4e-18 seq469 105 1e-17 seq10857 91.5 3e-13 seq7101 89.7 9e-13 seq7888 84.2 4e-11 seq726 84.2 4e-11 >seq378 Length=86116 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || ||||| || | |||||||| | ||| || ||||| |||||||| ||||| | Sbjct 295 TTCCACCACGAAGACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCG 236 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 || || | || ||||||| || || |||||||| || || | ||| || || || | Sbjct 235 CAAGCGTTCGTCCGTCTTCTAGTTGTTTACCGGCGAAGATCAGACGTTGCTGATCAGGAG 176 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| ||||||||||| || ||||| ||||| ||| || || ||||||| ||| || | Sbjct 175 GAATTCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATAGTGTCTGATGACTCGA 116 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||||| || || |||||||| || | ||| || || |||||||||||| Sbjct 115 CTTCCAAAGTTATAGTTTTTCCAGTCAAGGTTTTCACAAATATCTGCATT 66 >seq2154 Length=27549 Score = 159 bits (176), Expect = 6e-34 Identities = 150/191 (79%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 68272 CTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATA 68331 ||||||||||||| ||||| | ||| || | || || || || || || || ||||| | Sbjct 4273 CTTTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAA 4214 Query 68332 TGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCT 68391 | | | ||||||||||| ||||| |||||||||||||||||||| ||||| || | Sbjct 4213 TCAAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTAT 4154 Query 68392 CGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 |||| ||||| | |||||| || || | ||||| ||||| || ||||| |||||||||| Sbjct 4153 CGATCGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTCTTGACGA 4094 Query 68452 ATATCTGCATT 68462 | ||||||||| Sbjct 4093 AAATCTGCATT 4083 >seq251 Length=97046 Score = 136 bits (150), Expect = 7e-27 Identities = 256/371 (69%), Gaps = 4/371 (1%) Strand=Plus/Plus Query 268223 ACAAAGTCCTCTGGCTCAGGAGACTGGAGCATTTTCCACATTGCTTCGACATAGTCCCGC 268282 ||||| || | || ||| | ||| | |||| ||||||| |||||||||||| | Sbjct 50107 ACAAAATCTTGAGGATCATTATGCTGCATCATTCTCCACATACATTCGACATAGTCTCTT 50166 Query 268283 GCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCG 268342 ||||| ||||| || || || || |||| || || || | ||||| | || | || Sbjct 50167 GCATGACCCCAGTCTCGTTTAGCATCCAAATTTCCAAGATAGAGGCAATCTTGATACCCT 50226 Query 268343 AGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGA 268402 || | |||| ||| |||| || || || || |||||||| || || || | Sbjct 50227 TCATTGATGCGTACAACCGCGCGGGTAATCTTGCGAGTCACGAATGTTAGCCCCCGGCGT 50286 Query 268403 GGGCTCTCGTGGTTGAAGAGGATGCCGTTGCAC-GCGAACATGCCATATGCCTCACGGTA 268461 || |||||||| || || | ||| || || ||| || || || |||||| || | ||| Sbjct 50287 GGACTCTCGTGATTAAATAAGATTCCATT-CACTGCAAATATTTTATATGCTTCTCTGTA 50345 Query 268462 GTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAA 268521 || ||||||| ||| |||||||| ||||||||| |||||||||| || || | || Sbjct 50346 ATTAACGACCGACCAATATGCAAATTGCTTTGCAACACCGTACGGAGATCGCGGGTAAAA 50405 Query 268522 GGGCGTCGTGATC-TTTTGAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATG 268580 |||| || || ||||| || ||||||| | || || ||||||| || || | Sbjct 50406 AACCGTC-TGTTCATTTTGTGGCGTTTCTCGAGCGTTCCCGTAGAGCTCACTCGTGGAAG 50464 Query 268581 CTTGGTAGAAC 268591 |||| || ||| Sbjct 50465 CTTGATAAAAC 50475 >seq3650 Length=4340 Score = 114 bits (126), Expect = 2e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 68316 TGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATC 68375 || || || ||||| || || | ||| || || || ||||| ||||| |||||||||||| Sbjct 4 TGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCTTTGTCTTGAATC 63 Query 68376 TTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCC 68435 || ||||| || ||||| ||||||| || || |||||||| |||||||| ||||| Sbjct 64 TTGGCCTTTACATTATCGATCGTGTCTGAAGACTCAACTTCCAAAGTGATGGTCTTTCCA 123 Query 68436 GTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || || || |||||||| Sbjct 124 GTAAGCGTTTTCACAAAAATCTGCAT 149 >seq3863 Length=215 Score = 107 bits (118), Expect = 4e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 68316 TGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATC 68375 || || || ||||| || || | ||| || || || ||||| ||||||||||| || ||| Sbjct 4 TGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGGATC 63 Query 68376 TTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCC 68435 || ||||| ||| || || ||||| | ||| || |||||||| || |||||||| || Sbjct 64 TTCGCCTTCACGTTGTCAATAGTGTCCGATGACTCGACTTCCAAAGTTATGGTTTTCCCA 123 Query 68436 GTGAGGGTCTTGACGAATATCTGCATT 68462 || || ||||| || || || |||||| Sbjct 124 GTCAGCGTCTTAACAAAAATTTGCATT 150 >seq469 Length=169936 Score = 105 bits (116), Expect = 1e-17 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 || ||||| | || || ||||| || || || | ||||||||| || ||||| |||||| Sbjct 159199 CCGTCTTCAAGTTGTTTTCCGGCAAAAATTAGACGTTGTTGGTCAGGAGGAATTCCTTCC 159140 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 |||||||||||||| |||||| || || ||||| |||||||||||||| | || Sbjct 159139 TTGTCTTGAATCTTGCTCTTGACATTGTCAATCGTGTCCGCTGATTCTACTTCGAGTGTA 159080 Query 68424 ATGGTTTTTCC 68434 || |||||||| Sbjct 159079 ATTGTTTTTCC 159069 >seq10857 Length=49704 Score = 91.5 bits (100), Expect = 3e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 176268 TCCTTGCCTCCGTGAAGGCGGGAACCGAATTGTCCGCGAGGAAGAAGCAAATTGATGTTA 176327 || || || || |||||||||| |||||||| || |||| |||| |||||||||| Sbjct 7931 TCTTTTCCACCTTGAAGGCGGGTTCCGAATTGACCTGAAGGATACAGCATATTGATGTTA 7872 Query 176328 TTCGAACCCACGTAGTCTTGGGCCATTCCGACTATGGCGCCCTGGAGAGACGCCTCGCCG 176387 || ||||| || ||||| || ||||| || || | || || || ||||| || Sbjct 7871 TTGGAACCAACATAGTCCTGCGCCATGTTAACAATAGTAGAGTGCAGCGATGCCTCACCA 7812 Query 176388 TGGTGATAGCCGGCGTTCTCACTTGTGTATCCGGCAAACTGCGCGACTTTGATTTCTTGT 176447 || ||||| | | | |||||| |||||||| | ||| || ||||| ||||| ||| Sbjct 7811 TGATGATACGCTGTATGCTCACTACAATATCCGGCCAGCTGTGCTACTTTCATTTCCTGT 7752 >seq7101 Length=52731 Score = 89.7 bits (98), Expect = 9e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||||||||||||||||||||| || ||||| || || || || || || Sbjct 35708 ATACCTTCCTTGTCTTGAATCTTTGCCTTCACATTATCGATCGTATCAGCCGACTCCACG 35767 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| || || || || | |||||||| || |||||||| Sbjct 35768 TCCAATGTGATCGTCTTCCCGGTTAAAGTCTTGACAAAAATCTGCAT 35814 >seq7888 Length=285 Score = 84.2 bits (92), Expect = 4e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 84463 TAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACAT 84522 ||||||||| || |||||||||| ||||||| |||||||||| ||||||||||||||| Sbjct 54 TAGCTCAGTTGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGAGGGTTCGAGCCCCACGG 113 Query 84523 CGGGCA 84528 ||||| Sbjct 114 TGGGCA 119 >seq726 Length=155756 Score = 84.2 bits (92), Expect = 4e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 84463 TAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACAT 84522 ||||||||| || |||||||||| ||||||| |||||||||| ||||||||||||||| Sbjct 92 TAGCTCAGTTGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGAGGGTTCGAGCCCCACGG 151 Query 84523 CGGGCA 84528 ||||| Sbjct 152 TGGGCA 157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921481737381200