Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq500 123 3e-23 seq835 120 4e-22 >seq500 Length=28399 Score = 123 bits (136), Expect = 3e-23 Identities = 322/483 (67%), Gaps = 11/483 (2%) Strand=Plus/Plus Query 114788 TCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAG 114847 || || ||||| ||||| || || || |||||||| ||||| | || | ||| ||| Sbjct 23747 TCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAACAAATCTCGAGCT 23806 Query 114848 CGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGC 114907 ||| ||||| || ||||| ||| | |||| ||| || | ||||||||| ||| Sbjct 23807 CGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATATCCGCATGC 23866 Query 114908 CACGGTTCCAGGTACACCGCGATTGACCCCTTACGA---CGACCAGCCTGGTTTACATAC 114964 || || || || || | || | ||||| || || | |||| | || | || || Sbjct 23867 CAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCACCTTGATCAACGTAT 23926 Query 114965 CTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTC 115024 | |||||| |||| || || ||||||||||||| || |||| || ||||| ||| Sbjct 23927 CGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTTCCATTCGTC 23986 Query 115025 CCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGC--ATACCAATACCCCCTG 115082 || |||||| | || ||| | || || |||| | | | |||||||| || | Sbjct 23987 CCGCGAATATAACTGTTGGTGGAGC-GA-ATATTGGAAATACTGACGCCAATACCGCCAG 24044 Query 115083 CCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCAC 115142 |||||||||| || ||| || | | || || |||| || |||||||| || ||| Sbjct 24045 CCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCA- 24103 Query 115143 CCTTATTTGCGATA--AGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAA 115200 ||| || |||| || || || ||| | ||| || | || || || || ||||| Sbjct 24104 TCTTGCATG-GATAATAGAAAACACGACGATAATTGAGGTCGAGGCGTTCCCGCATTGAA 24162 Query 115201 GAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGAC 115260 || || || || || || | || | ||| ||||| | || || || ||||| || Sbjct 24163 AAGCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCCAAAAC 24222 Query 115261 GGC 115263 ||| Sbjct 24223 GGC 24225 >seq835 Length=76541 Score = 120 bits (132), Expect = 4e-22 Identities = 268/398 (67%), Gaps = 6/398 (2%) Strand=Plus/Plus Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118 || || || || ||||| |||||| ||||| || ||||| ||||| ||||| | || Sbjct 29806 TGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAATCCT 29865 Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178 || ||||||| ||| || || | || ||||| || ||||| |||||||| || || | Sbjct 29866 CGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTCGACGGCC 29925 Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCC 126238 || || || | | | || ||||| ||| |||||| || |||| |||| |||| Sbjct 29926 GCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCACCATTTCAACGCC 29985 Query 126239 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAG-AGTTCCTTCTT 126297 || || || || || | ||||||| || | ||||| || || | | || || Sbjct 29986 CATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCG-CACAGTAAATGCTGTTT 30044 Query 126298 TTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT 126357 ||| | ||||||||||||||| |||| || | | ||||| ||| ||| | | Sbjct 30045 TTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGTGTATATT 30104 Query 126358 TTCATTATGGCA--CTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCG 126415 ||| ||| ||| ||| | |||| || | || |||||| ||||| |||||| | Sbjct 30105 TTC--TATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGAACCTCACTG 30162 Query 126416 GCAAAATTGTTATTGATATTCTCAAAAACAATTCCATC 126453 ||||| | || ||| ||| ||||||||||| Sbjct 30163 CTGAAATTCATGGCGAGATTTTCATTGACAATTCCATC 30200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597262428906800