Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq500 129 6e-25 >seq500 Length=28399 Score = 129 bits (142), Expect = 6e-25 Identities = 421/647 (65%), Gaps = 14/647 (2%) Strand=Plus/Minus Query 93716 ATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCA 93775 ||||||| || |||| ||| |||||||||||||| ||||| || | || |||| | Sbjct 24353 ATTACGACTATTTTGGCTTTAAAACTCTGGAGAAATCGTATCTGTTGCGTGTGAATGGAA 24294 Query 93776 GGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACG 93835 || | || || || || || || | ||||| || || |||| || ||| | | Sbjct 24293 AAGTGTGTGAACGCCCACAACATATGATAATGCGAGTGGCTGTCGGCATACACA---AAG 24237 Query 93836 ACATGCCGAATG---TTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATG 93891 | | | ||| ||||| | | | ||||| | ||| | ||| |||| Sbjct 24236 AGAATTTGGATGCCGTTTTGGAAACGTATGAACACATGTCACAAAAGTTCTTTACGCATG 24177 Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 | || ||||| || ||||| ||||| || || || || | || |||||||| || Sbjct 24176 -CAACTCCGACGCTTTTCAATGCGGGAACGCCTCGACCTCAATTATCGTCGTGTTTTCTA 24118 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | | | | | || || ||| ||| |||| ||||| || || | |||||| Sbjct 24117 TTATCCATGCAAGATGATTCTATCGACGGCATTTACGACACGCTGAAACAATGTGCGTGT 24058 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 || ||||| | || || || || || ||||| | | | | || ||| Sbjct 24057 ATTTCAAAGTGGGCTGGCGGTATTGGCGTCAGTATTTCCAATATTCGCTCCACCAACAGT 23998 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 || || ||||| || ||||| | || || || | || || ||||| ||||| ||||| Sbjct 23997 TATATTCGCGGGACGAATGGAAGTTCGAATGGAATTGTTCCAATGCTTCGGGTGTTCAAT 23938 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 || | || || ||||| || || |||||||||| | |||| || ||||| || | ||| Sbjct 23937 GACACAGCTCGATACGTTGATCAAGGTGGTGGGAAGCGGAAAGGGTCTTTTGCAATTTAT 23878 Query 94192 CTCGAGCCCTGGCACGCGGA---CGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGC 94248 || ||||||||||| ||||| | | || |||| | || || || ||||| || || Sbjct 23877 CTAGAGCCCTGGCATGCGGATATCTTTGAG--TTTC-TGGAACTACGTAAGAATCATGGA 23821 Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || || || | | || |||| | || || ||||| ||| | || || || |||||| Sbjct 23820 AATGAACTCCATCGAGCTCGAGATTTGTTTTATGCTCTTTGGATCCCCGATCTGTTTATG 23761 Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGA 94355 ||||| || || | ||| | |||||| | || ||||| || || Sbjct 23760 AAACGTGTGGAAGACAACCAAGAATGGAGTTTATTCTGTCCGAACGA 23714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494647692871600