Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq835 114 2e-20 seq500 89.7 6e-13 >seq835 Length=76541 Score = 114 bits (126), Expect = 2e-20 Identities = 267/398 (67%), Gaps = 6/398 (2%) Strand=Plus/Plus Query 127532 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 127591 || || || || ||||| |||||| ||||| || ||||| || || ||||| | || Sbjct 29806 TGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAATCCT 29865 Query 127592 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 127651 || ||||||| ||| || || | || ||||| || ||||| ||||| || || || | Sbjct 29866 CGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTCGACGGCC 29925 Query 127652 GCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCC 127711 || || || | | | || ||||| ||| |||||| ||| |||| |||| |||| Sbjct 29926 GCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCACCATTTCAACGCC 29985 Query 127712 CACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAG-AGTTCCTTCTT 127770 || ||||| || || | || |||| || | ||||| || || | | || || Sbjct 29986 CATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCG-CACAGTAAATGCTGTTT 30044 Query 127771 TTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT 127830 ||| | ||||||||||||||| |||| || | | ||||| ||| ||| | | Sbjct 30045 TTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGTGTATATT 30104 Query 127831 TTCATTATGGCA--CTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCG 127888 ||| ||| ||| ||| | |||| || | || |||||| ||||| |||||| | Sbjct 30105 TTC--TATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGAACCTCACTG 30162 Query 127889 GCAAAATTGTTATTGATATTCTCAAAAACAATTCCATC 127926 ||||| | || ||| ||| ||||||||||| Sbjct 30163 CTGAAATTCATGGCGAGATTTTCATTGACAATTCCATC 30200 >seq500 Length=28399 Score = 89.7 bits (98), Expect = 6e-13 Identities = 369/574 (64%), Gaps = 11/574 (2%) Strand=Plus/Plus Query 116655 CTCGTACTTTGTGTAGAGGGCCTCAAACTC--TTCACCCACAGCCTCTGAGAGCCCTGGT 116712 |||||||||| || | || ||||| || ||| |||| | ||| | || | ||| Sbjct 23653 CTCGTACTTTTCATATAACGCATCAAATTCGCTTC-CCCAT-GTCTCATAAAGTCGTGGA 23710 Query 116713 GCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGG 116772 |||| | |||||||| | | ||||| || || || || ||||| || || Sbjct 23711 GCCTCGTTCGGACAGAATAAACTCCATTCTTGGTTGTCTTCCACACGTTTCATAAACAGA 23770 Query 116773 TCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTG 116832 || |||||||| || || | || | ||| ||| ||| ||||| || ||||| Sbjct 23771 TCGGGGATCCAAAGAGCATAAAACAAATCTCGAGCTCGATGGAGTTCATTTCCATGATTC 23830 Query 116833 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 116892 ||| | |||| ||| || | ||||||||| ||||| || || || || | || | Sbjct 23831 TTACGTAGTTCCAGAAACTCAAAGATATCCGCATGCCAGGGCTCTAGATAAATTGCAAAA 23890 Query 116893 GACCCCTTGCGA---CGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGA 116949 ||||| || || | |||| | || | || || | || || | || || || ||| Sbjct 23891 GACCCTTTCCGCTTCCCACCACCTTGATCAACGTATCGAGCTGTGTCATTGAACACCCGA 23950 Query 116950 AGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCT 117009 |||||||||| || |||| || ||||| ||||| |||||| | ||| ||| Sbjct 23951 AGCATTGGAACAATTCCATTCGAACTTCCATTCGTCCCGCGAATATAACTGTTGGTGGAG 24010 Query 117010 CTGACATCGTGGATGTGC--ATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACT 117067 | || || |||| | | | |||||||| || ||||||||||| || || || | Sbjct 24011 C-GA-ATATTGGAAATACTGACGCCAATACCGCCAGCCCACTTTGAAATACACGCACATT 24068 Query 117068 CCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGC 117127 | || || |||| || || ||||| || ||| | | | | | || || || Sbjct 24069 GTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCATCTTGCATGGATAATAGAAAACACG 24128 Query 117128 TCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACA 117187 ||| | ||| || | || || || || ||||| || || || || || || | || | Sbjct 24129 ACGATAATTGAGGTCGAGGCGTTCCCGCATTGAAAAGCGTCGGAGTTGCATGCGTAAAGA 24188 Query 117188 TACCTTGGGACATCTTATCGTAGGTCTCCAAGAC 117221 ||| ||||| | || || || ||||| || Sbjct 24189 ACTTTTGTGACATGTGTTCATACGTTTCCAAAAC 24222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613413563463600