Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq835 167 2e-36 seq2154 98.7 1e-15 seq378 93.3 4e-14 >seq835 Length=76541 Score = 167 bits (184), Expect = 2e-36 Identities = 411/616 (67%), Gaps = 12/616 (2%) Strand=Plus/Plus Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 |||||| || |||||||| ||||| | || || || | ||||| || || ||| Sbjct 29783 ACATCAGACATGCAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATT--TGA 29840 Query 132947 AAGTCAAG--CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004 || ||| || ||||| | || ||||| || ||||||||||| | | ||| || Sbjct 29841 AAAGCAAAGTCCAGGCATCAATCCTCGTTTCTTCAGCCAAAATATAGAGCAGAATGATCC 29900 Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT- 133063 || || |||| || ||||||||||| || || |||| | || | |||| ||| | Sbjct 29901 GGAGAAAAAGATTCCTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATA 29960 Query 133064 CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTT 133123 ||||| || ||| || |||||||| || || | | |||||||| || |||| Sbjct 29961 CTTTGGAT-CGCACCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTT 30019 Query 133124 CGATGGCGTTCAACAAACGGAGTTTCTCTTCCGA-GGAACGC--ACGTAGGTGTCGATGA 133180 | || ||| || ||| | |||| ||| | ||| | | ||| || || || | Sbjct 30020 CAATCGCGCACAGTAAATGCTGTTT---TTCAGTTGGATCTTTGATGTATGTATCAATCA 30076 Query 133181 GGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACC 133240 |||||||| ||||||||||| || || || || |||||||| ||||||||||| | Sbjct 30077 ATAACGAATACACTTCCGAGTGTATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATC 30136 Query 133241 GCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGC 133300 | || ||| | ||| || || |||| | | | |||||||| ||||| || | Sbjct 30137 GAGCTTCGGGGATCTGAACCTCACTGCTGAAATTCATGGCGAGATTTTCATTGACAATTC 30196 Query 133301 CGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA 133360 | || ||||| || || ||||||| |||||| ||||| || || | || ||||| | Sbjct 30197 CATCACTGGCTGCAAAGAAGGCCAACACGTGTTTGATAAAGTGTCTTTCATTGTCCGATA 30256 Query 133361 AGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACG 133420 |||||| | |||| | || || | || || |||||||||| | Sbjct 30257 TATTAAGCCAGTCATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTG 30316 Query 133421 CCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACC 133480 |||| ||||| || ||||| ||| || || || | |||||| ||||| | ||||| | Sbjct 30317 CCTCTGCTTTCTTATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGC 30376 Query 133481 GGCGGGGGTTTTCGCG 133496 || || ||||| || Sbjct 30377 GGTTCGGATTTTCTCG 30392 >seq2154 Length=27549 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 || |||||| || ||||| || || ||||| || ||||| ||||| | || ||||| | Sbjct 4080 AAGAATGCAGATTTTCGTCAAGACACTCACCGGGAAAACAATCACTCTTGAGGTCGAATC 4139 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | | || | || || | ||||| || |||||||| |||| Sbjct 4140 ATCCGACACGATCGATAATGTGAAGGCGAAGATTCAAGACAAGGAAGGAATTCCTCCCGA 4199 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||||||||| | |||| ||| || ||||| |||| |||| || || ||| || || Sbjct 4200 CCAACAGCGTTTGATTTTCGCAGGAAAACAATTGGAGGACGGCCGAACGCTCGCGGATTA 4259 Query 38420 CAACATCCAAAA 38431 |||||||||||| Sbjct 4260 CAACATCCAAAA 4271 >seq378 Length=86116 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| ||||| || ||||| | || || ||||| || || | || |||||| | | Sbjct 66 AATGCAGATATTTGTGAAAACCTTGACTGGAAAAACTATAACTTTGGAAGTCGAGTCATC 125 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | || | || |||| ||||| || |||||||| | || | Sbjct 126 AGACACTATTGACAACG-TGAAGGCGAAGATCCAGGACAAGGAAGGAATTCCTCCTGATC 184 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || || || | ||| || ||||| || || |||| || || || || |||| Sbjct 185 AGCAACGTCTGATCTTCGCCGGTAAACAACTAGAAGACGGACGAACGCTTGCGGATTACA 244 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| || ||| | ||| |||| |||||||| ||| Sbjct 245 ACATCCAGAAAGAATCAACGTTGCACTTGGTGCTACGT 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500096461126400