Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq500 154 2e-32 >seq500 Length=28399 Score = 154 bits (170), Expect = 2e-32 Identities = 1119/1773 (63%), Gaps = 100/1773 (6%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 |||||| | ||| | ||||| || || |||| || || || || | ||| | || Sbjct 24280 CCCACAACATATGATAATGCGAGTGGCTGTCGGCATACACAAAGAGAATTTGGATGCCGT 24221 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 |||||| || || || | ||||| | | || | || ||||| || || || || Sbjct 24220 TTTGGAAACGTATGAACACATGTCACAAAAGTTCTTTACGCATGCAACTCCGACGCTTTT 24161 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTAT-TGCAAACAAGGAGG 111789 ||| || || || || |||| ||| | || ||||| || | | || |||| | | Sbjct 24160 CAATGCGGGAACGCCTCGACCTCAATTATCGTCGTGTTTTCTATTATCCATGCAAG-ATG 24102 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 |||| ||| | |||||||||| ||| || | ||||||| || ||||||||||||| Sbjct 24101 ATTCTATCGACGGCATTTACGACACGCTGAAACAATGTGCGTGTATTTCAAAGTGGGCTG 24042 Query 111850 GTGGTATCGGGAT--GCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTAC 111907 | ||||| || | | | |||| || | | ||| ||| | |||| | || || Sbjct 24041 GCGGTATTGGCGTCAGTATTTCCA--ATATTCGCTCCACCAACAGTTATATTCGCGGGAC 23984 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 ||||| || |||| ||| ||||||||||||| || || || | |||||| || || Sbjct 23983 GAATGGAAGTTCGAATGGAATTGTTCCAATGCTTCGGGTGTTCAATGACACAGCTCGATA 23924 Query 111968 TGTAAACCAA---GCTGGGCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024 || | ||| | |||| || || || ||| | ||| | ||||| ||||| ||||| Sbjct 23923 CGTTGATCAAGGTGGTGGGAAGCGGAAAGGGTCTTTTGCAATTTATCTAGAGCCCTGGCA 23864 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 ||||||||| | ||||| || || | ||| || || || |||| || Sbjct 23863 TGCGGATATCTTTGAGTTTCTGGAACTACGTAAGAATCATGGAAATGAACTCCATCGAGC 23804 Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144 || ||| | || | ||||| ||||| || ||||| || ||||| | || || || | Sbjct 23803 TCGAGATTTGTTTTATGCTCTTTGGATCCCCGATCTGTTTATGAAACGTGTGGAAGACAA 23744 Query 112145 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGA 112204 | ||| | | || ||||| || |||| || | || | || | | |||| | Sbjct 23743 CCAAGAATGGAGTTTATTCTGTCCGAACGAGGCTCCACGACTTTATGA-GACATGGGGAA 23685 Query 112205 G-GAGTTTGAAGCCCTCTACACAAAGTACGAG---GAAGAAAGT---CGGGCGACTGCGA 112257 | || ||||| || | || |||||||||| || | | | || ||||| | Sbjct 23684 GCGAATTTGATGCGTTATATGAAAAGTACGAGTCTCAAAACATTGCCCGAAAGACTGTCA 23625 Query 112258 CGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317 | ||||| | ||||| || ||| | | ||| | ||||| || || | Sbjct 23624 AAG-CCCAGC-----AATTGTGGTTTGCCATTTTGGATAGTCAGATTGAGACCGGAACGC 23571 Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAAT-TTGG----G 112372 | |||||||||||||||||||| ||||| | || ||||| ||||| |||| Sbjct 23570 CGTATATGCTTTACAAAGACGCTTGTAATCGTAAATCCAATCAGCAGAATCTTGGAACCA 23511 Query 112373 TGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGA---CAAAGATGA 112429 | ||||||| ||| ||||| |||||| | || | |||| |||||| | Sbjct 23510 TTCGATCAAG-----CAATCTCTGCTGTGAAATCATCGAGTACTCAGACTCCAAAGAAG- 23457 Query 112430 GACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAA 112489 ||| || || || | || || ||||| | | || | |||| ||| | ||| Sbjct 23456 --TGGCAGTATGCAATTTGGCTTCCATCGCATTGTCAAAATTTGTGTATC-----AGAAA 23404 Query 112490 GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAG 112549 || |||| | | || |||| | ||||| | || |||| || || ||||| || |||| Sbjct 23403 GA-ATTTCAGTTTGCAAAATTATACGAAATCACAAAAATCGTTACGAAAAATCTCAACAA 23345 Query 112550 AGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTC--GTAAATCTAATATGAGACAC 112607 | | |||||| |||| ||| || || || | || | ||| | |||| Sbjct 23344 AATCATTGATCTCAATTATTATCCGATTCCTGAAGCACAAGTGA--GCAATCAGCGACAT 23287 Query 112608 CGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGAT--GTATTCA-TTCTTTGTCGCCAC 112664 || || ||||| |||| || |||||||| || ||| || || | | | ||| | Sbjct 23286 CGACCGATTGGAATCGGCGTTCAAGGTCTTGCCGATACGTTTTTACTGATGAGTCTTC-- 23229 Query 112665 GCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCAC 112724 ||||||| | | | || || |||| || ||||| || |||||| | Sbjct 23228 -CATTTGAAAGCAAAGCTGCTCGCGAGCTCAACAAAGAAATTTTTGAAACGATGTATTTC 23170 Query 112725 GCCGCTCTTGAGGCGAGTTC---GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTT 112781 || || | || || ||| ||| |||||| || || || || || | || | Sbjct 23169 GCGGCGATGGAAGC---TTCCATGGAATTGGCACGGGAACTCGGACCGTACGAGAGCTAT 23113 Query 112782 GAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG 112841 | || || |||| | | ||| | ||||||||||||||| || |||| | || | Sbjct 23112 GCTGGATCACCAGTTAGTCGAGGTATCTTTCAATTTGATATGT-GGCAGGTCATTCC-CG 23055 Query 112842 CTTCACTACGACTGGGACGCTCTCAAG-----GAACGCATCAAGGAG-----AAGGGTCT 112891 ||| ||| ||||| | ||| ||| | | |||| || | || | Sbjct 23054 ATTCCGGTCGA-TGGGA---TTGGAAGCAGTTGAAAG-AGCAAGTAGCTACTCACGGAAT 23000 Query 112892 TCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGT 112949 || ||| ||||| || | || || |||||||| ||||| || || ||||| | || Sbjct 22999 CCGAAAC--TCTTTGCTGCTCGCTCCGATGCCAACCGCCTCAACGGCTCAAATTCTCGGC 22942 Query 112950 AATAATGAATGCTTTGAACCCTACACGACGAACA---TCTATCTGAGAAGAACCCTCGCG 113006 ||| || | | || || | ||| | |||| || ||| || | |||||| Sbjct 22941 AATTGCGAGTCTATCGAGCCGTTCACTTCCAACATGTTCAATC---GACGCGTCCTCGCT 22885 Query 113007 GGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGG 113066 ||||| ||| ||||||||||| ||||| |||| || || | ||||| | | ||| Sbjct 22884 GGAGAATTTACAATTGTCAACAAATATCTCATGGAAGAGCTTATTGAGATGAATTTGTGG 22825 Query 113067 ---TCCAAGGATATGAAGGATCT-CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGT 113122 || | | | ||| | | | | | || || |||||| | |||||||| | Sbjct 22824 ACATCAGACGTTCGGAATCAAATCCTTCGCGATCGC----GGTTCCGTACAAAATATCGC 22769 Query 113123 GGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGA 113182 || ||||| | | | || | |||| |||||||||||||||||| |||| Sbjct 22768 TGAAATTCCGCCTCATGTGAAAGAAAAGTACAAAACAGTTTGGGAAATCAAGCAAAAGGC 22709 Query 113183 TGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCT 113242 | | |||||||| || ||||| || | |||| ||| |||||| | ||| | Sbjct 22708 GATTTTGGACATGGCTGCCGATCGAGGAGCGTACATTTGTCAGAGTCAATCACTTAATAT 22649 Query 113243 ATTCATGGAAAGTCCAACGATGTC--CAAGCTCTCTTCTATGCACATGTACAGTTGGAAG 113300 ||| | || || |||| || ||| |||| ||||| | ||| ||||| Sbjct 22648 TCACATTGCCGACCCGAC--TGTCAGTAAACTCACTTCGATGCATTTCTACGCATGGAAA 22591 Query 113301 AAGGGTCTCAAAACGGGGATGTATTACCTCCGA 113333 || ||||||||||| || ||||| || |||||| Sbjct 22590 AAAGGTCTCAAAACAGGAATGTACTATCTCCGA 22558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620647659191200