Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq500 170 2e-37 seq835 140 4e-28 >seq500 Length=28399 Score = 170 bits (188), Expect = 2e-37 Identities = 683/1057 (65%), Gaps = 44/1057 (4%) Strand=Plus/Plus Query 106279 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAG--ACTTTCGC 106336 ||| || ||||||||||| || | ||||| |||| |||||| ||| |||| || Sbjct 23251 ATCGGCAAGACCTTGAACGCCGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGC 23310 Query 106337 G-CAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT 106395 ||| || |||||| |||| ||||||| | ||| |||||||| ||||| || Sbjct 23311 TTCAGG---AATCGGATAATAATTGAGATCAATGATTTTGTTGAGATTTTTCGTAACGAT 23367 Query 106396 CTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTT 106455 ||||||||||| | | |||| || | | ||| | | | ||| || ||| | || Sbjct 23368 TTTTGTGATTTCGTATAATTTTGCAAACTGAAA--TTC---TTTCTG-ATACACAAATTT 23421 Query 106456 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 106515 || | ||||| || ||||||||||| || ||| || | |||| |||||| | Sbjct 23422 TGACAATGCGATGGAAGCCAAATTGCATACTGCCACTTCTTTGGAGTCTGAGTACTCGAT 23481 Query 106516 AATTTCTGTACACAAGTTG---GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTT 106572 ||||| || | ||| || | ||| || || | ||||| || || || Sbjct 23482 GATTTCACAGCAGAGATTGCTTGATCG---AATGGTTCCAAGATTCTGCTGATTGGATTT 23538 Query 106573 TTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAG 106632 || || || || ||||| ||||| || ||||| || ||||| |||| | | Sbjct 23539 ACGATTACAAGCGTCTTTGTAAAGCATATACGGCGTTCCGGTCTCAATCTGACTATCCAA 23598 Query 106633 AATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGTT--GGCCCGTCCCTCCGCCTCG 106690 ||| || ||||| | |||| ||| | | || ||| | | |||| Sbjct 23599 AATGGCAAACCACAATTGCTGGGCTTTGACAGT--CTTTCGGGCAATGTTTTGAGACTCG 23656 Query 106691 TACTTTGTGTAGAGGGCTTCAAACTC-CTCACCCACCGCGTCGGAGAGACCTGGTGCCTT 106749 |||||| || | || ||||| || || |||| | || | || | ||| |||| Sbjct 23657 TACTTTTCATATAACGCATCAAATTCGCTTCCCCATGTC-TCATAAAGTCGTGGAGCCTC 23715 Query 106750 GTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGG 106809 || |||||||| | | ||||| || || || || ||||| || || || || Sbjct 23716 GTTCGGACAGAATAAACTCCATTCTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGG 23775 Query 106810 AATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCG 106869 ||||| || | |||| | ||||| | ||| ||| | || || || || Sbjct 23776 GATCCAAAGAGCATAAAACAAATCTCGAGCTCGATGGAGTTCATTTCCATGATTCTTACG 23835 Query 106870 TAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC 106929 || || || ||||| | ||||||||| ||||| ||||| ||||| | ||| | ||| || Sbjct 23836 TAGTTCCAGAAACTCAAAGATATCCGCATGCCAGGGCTCTAGATAAATTGCAAAAGA-CC 23894 Query 106930 CTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAG 106983 ||||| ||| ||| |||||| || || || |||||| | || || || ||||| Sbjct 23895 CTTTC--CGCTTCCCACCACCTTGATCAACGTATCGAGCTGTGTCATTGAACACCCGAAG 23952 Query 106984 CATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCT 107043 |||||||| ||| |||| || ||||| ||||| |||||| | || ||| | Sbjct 23953 CATTGGAACAATTCCATTCGAACTTCCATTCGTCCCGCGAATATAACTGTTGGTGGAGCG 24012 Query 107044 CACATCATGGATGTGC--ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCC 107101 | || |||| | | | |||||||| |||||||||||||| || |||||| | Sbjct 24013 AATAT--TGGAAATACTGACGCCAATACCGCCAGCCCACTTTGAAATACACGCACATTGT 24070 Query 107102 GTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTG 107161 | || || | || || |||| ||| || || || | ||| | || || || Sbjct 24071 TTCAGCGTGTCGTAAATGCCGTCGATAGAATCATCTTGCATGGATAATAGAAAACACGAC 24130 Query 107162 GACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTG---AATGAAC 107218 || | || |||| || || || |||||||| || || || ||||| || || |||| Sbjct 24131 GATAATTGAGGTCGAGGCGTTCCCGCATTGAAAAGCGTCGGAGTTGCATGCGTAAAGAAC 24190 Query 107219 ATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATG 107278 | ||| ||||| | || || || ||||| || | ||| | | || ||| ||| Sbjct 24191 TT---TTGTGACATGTGTTCATACGTTTCCAAAACGGCATCCAAATTCTCTTTGTGTATG 24247 Query 107279 CCGATGGCCACACGCATAAACATGTATTG-GGGTGTT 107314 |||| ||||| ||||| | ||| | ||| ||| ||| Sbjct 24248 CCGACAGCCACTCGCATTATCATATGTTGTGGGCGTT 24284 >seq835 Length=76541 Score = 140 bits (154), Expect = 4e-28 Identities = 303/449 (67%), Gaps = 6/449 (1%) Strand=Plus/Plus Query 117286 TGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCC 117345 || || || ||||| || || || |||||||| ||||| || || ||||| | || Sbjct 29806 TGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAATCCT 29865 Query 117346 CGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACAC 117405 || ||||||| |||| | |||| ||||||||| |||||||| ||||| || || || | Sbjct 29866 CGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTCGACGGCC 29925 Query 117406 GCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGCC 117465 ||||| || | | | || || || ||| | |||||| || ||||||||| ||| Sbjct 29926 GCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCACCATTTCAACGCC 29985 Query 117466 CATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTTT 117525 |||| || || || || || || | |||| || || | ||| |||| ||| Sbjct 29986 CATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCACAGTAAATGCTGTTTT 30045 Query 117526 TCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCATT 117585 |||| | ||| || |||||| | ||||||||| ||||| ||| || | || Sbjct 30046 TCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGTGTATATTT 30105 Query 117586 TCATTATGGCA--TTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCATCCG 117643 || ||| ||| |||| || |||| || | || |||||| ||||| || ||| | | Sbjct 30106 TC--TATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGAACCTCA-CTG 30162 Query 117644 CA-AAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGG 117702 | ||||| | || ||| ||| ||||||||||| | |||||||| |||| Sbjct 30163 CTGAAATTCATGGCGAGATTTTCATTGACAATTCCATCACTGGCTGCAAAGAAGGCCAAC 30222 Query 117703 ATGTACTTTATGAATTTCTTTTCATTTTC 117731 | || || || || | ||||||| || Sbjct 30223 ACGTGTTTGATAAAGTGTCTTTCATTGTC 30251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589890754180400