Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq1306 167 6e-37 seq221 118 3e-22 >seq1306 Length=1223 Score = 167 bits (184), Expect = 6e-37 Identities = 378/559 (68%), Gaps = 22/559 (4%) Strand=Plus/Minus Query 9204 GGCGAGCGTGGCCGGCCGCCGATTGGCCTGGAACGGATGCTGCGGATCTACTTGCTGCAG 9263 ||| |||| || || || |||| || || || ||| |||| || ||| | ||||| Sbjct 988 GGCAAGCGCGGACGCCCTGCGATAGGGGTGTCGCGCATGTTGCGCATGTACGTCGTGCAG 929 Query 9264 CAGTGGTACGGGTTGTCGGACGAAGGGCTTGAAGATGCGCTCTACGACAGCATCGCGATG 9323 ||||| | ||| || || || ||||| |||||||| ||||||||||| || || Sbjct 928 CAGTGTTTCGGTTTCTCCGATGAAGGTTGCGAAGATGCCGTCTACGACAGCCAGGCCATC 869 Query 9324 CGCGCCTTCGCGGGCATCGACCTGGCGCGCGAGAACGTGCCGGACGCCACCACGCTGTTG 9383 |||| || ||| |||||||||| |||||| | || || |||||||| || || Sbjct 868 CGCGGTTTTATGGGTATCGACCTGGGTCGCGAGTCGGCACCAGATGCCACCACCTTGCTG 809 Query 9384 AAATTCCGGCGCCTGCTGGTCGAGCACGCA-CTGACGCGAAAGCTGTTCGACGAGAT--- 9439 || || ||| |||||| | || || || ||||| |||||| || ||| Sbjct 808 CGTTTTCGCCGCTTGCTGGAAGC-CAATCAGCTAACGCGGCTGCTGTTTGAAACGATTAA 750 Query 9440 -CGGCATCGAGTTGTGCGAGC-GCGGGCTGATGATGAAGGAAGGCACGCTGGTGGATGCG 9497 | ||||| || || ||| | ||||| || | ||||||||||| | || || || Sbjct 749 CCAGCATC----TG-GCCAGCCGGGGGCTACTGCTCAAGGAAGGCACTATCGTCGACGCT 695 Query 9498 ACGATCTTCGAGGCTGCGCCGTCCACG---AAGAACGCCGGGAAG--AGCCGTGACCCGG 9552 || | ||| | |||||| || || |||||| || |||| | ||||| || | Sbjct 694 ACCCTGATCG---CCGCGCCGCCCTCGGTCAAGAAC--CGAGAAGGCAAGCGTGATCCTG 640 Query 9553 AGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGGCCCATGTCGGCG 9612 ||||||||||| | | ||| ||||| | ||| | || || ||||||||||| | || | Sbjct 639 AGATGCATCAGGCCAGGAAAGGCAATCAATGGCACTTTGGGATGAAGGCCCACATTGGTG 580 Query 9613 TCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCAACGAGCCGGACG 9672 | |||||| ||||| |||||||| ||||| || ||||| || |||| | |||| | Sbjct 579 TAGACGCCACGTCGGGGCTGGTGCACAGCGTAGTAGGGACGGCCGCTAACGTGGCGGATG 520 Query 9673 TATCGCAGGCCCACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTGGCGATGCGGGCT 9732 | | |||| | ||||||||||| | || | | | || || || || | Sbjct 519 TCACCCAGGTTGGCCAGTTGCTGCACGGTGACGAAACCTATGTTTCGGGTGACGCTGGAT 460 Query 9733 ACACCGGCGTGGACAAGCG 9751 ||||||| | || |||||| Sbjct 459 ACACCGGTGCGGCCAAGCG 441 >seq221 Length=1203 Score = 118 bits (130), Expect = 3e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 9543 CGTGACCCGGAGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGGCC 9602 || || || ||||||||||| || ||||| || ||| | | ||||||||| ||||| Sbjct 544 CGCGATCCTGAGATGCATCAAACCAAGAAAGGTAACCAGTACTATTTCGGCGCTAAGGCT 603 Query 9603 CATGTCGGCGTCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCAAC 9662 || |||||| ||||| ||| || || |||||||| |||||||| || |||||||| Sbjct 604 CACATCGGCGCCGACGACGAGTCAGGCCTGGTGCACAGCGTGGTAGTAACAGCGGCCAAT 663 Query 9663 GAGCCGGACGTATCGCAGGCCCACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTGGC 9722 | | | ||||| |||||| | ||||||||||| | || | | || | | | Sbjct 664 GTGGCAGACGTCACGCAGGTTGCCAAACTGCTGCACGGCGAGGAAAACGTAGTCTGCGCC 723 Query 9723 GATGCGGGCTACACCGGCGTGGACAAGCGCGAGGA 9757 || || || |||||||| || || |||||||| || Sbjct 724 GACGCAGGTTACACCGGGGTTGAGAAGCGCGAAGA 758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119016340871960