Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq49 123 3e-23 >seq49 Length=23363 Score = 123 bits (136), Expect = 3e-23 Identities = 273/399 (68%), Gaps = 8/399 (2%) Strand=Plus/Plus Query 159388 AATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCA 159447 |||||||| ||||| ||| ||| || |||||||| ||||| || || || ||||| Sbjct 4791 AATGTATGCTTGATTCCAATGTCTGCTCATGGAACGAATCCAGCTAGTGCGGTAATGGCT 4850 Query 159448 GGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGA-CATCAAAGATCT 159506 |||||||||||||| | ||| ||| || || | || || || || | || | ||| | Sbjct 4851 GGGATGAAAGTTGTGGTCGTCCAGTCAGACGACAAGGGGAATATCGATCGTC-AGGATTT 4909 Query 159507 AGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATC 159566 ||| || ||||| | | | | || |||| || | | ||||| || || ||||| Sbjct 4910 AGAAAACAAAGCGAAAAAGCACGCAAATGAATTGAGTGCTCTCATGATCACCTACCCATC 4969 Query 159567 TACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAG-ATTG-TTCATGAGAAT 159624 || ||||||| || | | ||| | | |||||| | | |||| | || | || Sbjct 4970 CACGTATGGTGTCTTCG-AGCAAGGAGTCCA-AGATATCTGCGCATTGATCCACTCGTAT 5027 Query 159625 GGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCT-AGCAAAACC 159683 ||||| || || || | ||||| || ||| | |||||||| || || || |||| | Sbjct 5028 GGTGGCCAAGTGTACATGGATGGAGCGAATATGAATGCACAAGTCGGCCTGTGCAATCCG 5087 Query 159684 ATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACA 159743 | | | ||| || ||||| || ||||| || | || || |||||||| || || || Sbjct 5088 AAAT-CCATTGGAGCTGATGTCTGCCATCTCAATCTCCACAAAACATTCTGCATCCCTCA 5146 Query 159744 TGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGC 159782 || ||||| ||||| || || || | ||||| ||||| Sbjct 5147 CGGTGGTGGCGGTCCAGGAGTTGGAACCATTGGCGTAGC 5185 Score = 98.7 bits (108), Expect = 1e-15 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 157882 ATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAG 157941 || || ||||| || ||| |||||||||| | || || || || ||| | || ||| Sbjct 3228 ATCGGCCAAGGGTATCATGACTGCATCACACCCGCGGTTATCCAACGTAACATGCTGGAG 3287 Query 157942 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 158001 ||||| | ||||| ||| | || || || || ||||||||||| || || || ||||| Sbjct 3288 AATCCGGGCTGGTATACAGCGTATACGCCGTACCAAGCTGAGATCTCACAAGGTCGATTG 3347 Query 158002 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAAC 158061 ||| | | |||| ||| || | | ||| ||||||||| | | | || Sbjct 3348 GAAATGCTGCTGAATTTCCAGACAATGGTTCAAGATCTCACAGGATTGGAATTCTCGAAT 3407 Query 158062 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 || || || ||||||||||| || || ||||| ||||||||| Sbjct 3408 GCGTCACTTTTAGATGAAGCGACAGCTGCAGCTGAAGCAATG 3449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587961448685600