Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq835 260 2e-64 >seq835 Length=76541 Score = 260 bits (288), Expect = 2e-64 Identities = 595/881 (68%), Gaps = 22/881 (2%) Strand=Plus/Plus Query 36890 ATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCAT 36949 |||||||||||| ||| | || ||||| ||||| ||||||| || ||||| | ||||| Sbjct 29505 ATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGATATCATATCCAT 29564 Query 36950 AAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCTTCAGA-AGCC 37008 | ||||| |||||||| | | ||||| | || | | || | | | | | | Sbjct 29565 CCAGTCAAAGGGATTAGAAGCTTGATATAACTTGCTG-ACGCCAAGTGCATGTAACAATC 29623 Query 37009 TATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTA 37068 |||||| ||||| || ||||||| || ||| | | || || |||||||| | | Sbjct 29624 GATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGA 29683 Query 37069 CTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAA 37128 |||||| || |||| | | |||| || ||| || || || || || || || | Sbjct 29684 CTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAATGATTGCAT 29743 Query 37129 CAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAA--ACAATAAACATGCAAAATC 37186 |||| |||| | | | ||||| | || | ||| | ||||||||| || Sbjct 29744 GAATAGAGCCTTCTG--GAAGCTTATTTACCAGTTTCGAGTACATCAGACATGCAAAGTC 29801 Query 37187 ACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAA 37246 |||||||| |||||||| | ||| || | ||||| |||||| | ||| ||||| || Sbjct 29802 ACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAA 29861 Query 37247 ACCTCtttttttAATCCAAAATATTGCTGCAAAA-GATCCAGAAAAGAAAATACCTTCAA 37305 |||| ||| || | ||||||||| | ||| || ||||| || || || || ||||| | Sbjct 29862 TCCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCGGAGAAAAAGATTCCTTCGA 29920 Query 37306 CTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAA--CTATA-ATCAGAAATCCAtt 37362 | || ||||| ||||| | | | | || | | | || | ||| | ||||| Sbjct 29921 CGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCA---CCATT 29977 Query 37363 tttttGTCCAATCTGCCTTTAATT-TAACACATTCAATTGTTTCAATTGCTTTTAAGAGA 37421 | | ||| | ||| |||| | |||| || ||||||||||| || | || Sbjct 29978 TCAACGCCCATTGTGC-TTTATTGGTAACGCACGGGATTGTTTCAATCGCGC---ACAGT 30033 Query 37422 AAGtttttttCTTCACT---ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCA 37478 || | | || |||| | |||| | || || |||||||| | ||| ||||| ||| Sbjct 30034 AAATGCTGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCC 30093 Query 37479 GAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGA 37538 ||||| |||||||| || || || ||||| || ||||| || | |||||| | | ||| Sbjct 30094 GAGTGTATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGA 30153 Query 37539 ACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAG 37598 || || | || || | || | |||||||| || || |||||||| ||||||||| Sbjct 30154 ACCTCACTGCTGAAATTCATGGCGAGATTTTCATTGACAATTCCATCACTGGCTGCAAAG 30213 Query 37599 AAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTA 37658 || || | || | ||| ||||| |||||||||| | |||| || ||| ||||| Sbjct 30214 AAGGCCAACACGTGTTTGATAAAGTGTCTTTCATTGTCCGATATATTAAGCCAGTCATTC 30273 Query 37659 ATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATAC 37718 || || | ||||| | ||| || |||||||||| |||||| ||| |||||| Sbjct 30274 ATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTTATAC 30333 Query 37719 ATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAA 37759 || |||||| ||| |||||||| ||||||| ||||| Sbjct 30334 ATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAA 30374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592226397648400