Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq500 167 3e-36 seq835 140 4e-28 >seq500 Length=28399 Score = 167 bits (184), Expect = 3e-36 Identities = 674/1048 (64%), Gaps = 33/1048 (3%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 |||||| | ||| | ||||| || || ||||||| ||| || | | ||| | || Sbjct 24280 CCCACAACATATGATAATGCGAGTGGCTGTCGGCATACACAAAGAGAATTTGGATGCCGT 24221 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATT---CACGCAACACCAACCCT 75327 ||||| || || || | ||||| ||| | |||| || || ||||| || || || Sbjct 24220 TTTGGAAACGTATGAACACATGTCACAA---AAGTTCTTTACGCATGCAACTCCGACGCT 24164 Query 75328 CTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGA 75387 |||||||| || || || |||| || | || || || || | ||| | || Sbjct 24163 TTTCAATGCGGGAACGCCTCGACCTCAATTATCGTCGTGTTTTCTATTATCCATGCAAGA 24104 Query 75388 GGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGC 75447 || || ||| |||| || || | || || | | |||||| || ||||||||||| Sbjct 24103 TGATTCTATCGACGGCATTTACGACACGCTGAAACAATGTGCGTGTATTTCAAAGTGGGC 24044 Query 75448 TGGGGGTATTGGGAT--GCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 ||| |||||||| | | | |||| || | | ||| || | |||||| ||| Sbjct 24043 TGGCGGTATTGGCGTCAGTATTTCCA--ATATTCGCTCCACCAACAGTTATATTCGCGGG 23986 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || ||||| || |||| ||| ||||||||||||| || || || | |||||| || Sbjct 23985 ACGAATGGAAGTTCGAATGGAATTGTTCCAATGCTTCGGGTGTTCAATGACACAGCTCGA 23926 Query 75566 TATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || || |||||| || | || || ||||| | || | || | || || ||| Sbjct 23925 TACGTTGATCAAGGTGGTGGGAAGCGGAAAGGGTCTTTTGCAATTTATCTAGAGCCCTGG 23866 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 ||||| |||||| | ||||| || || |||| || || || | ||| ||| Sbjct 23865 CATGCGGATATCTTTGAGTTTCTGGAACTACGTAAGAATCATGGAAATGAACTCCATCGA 23806 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | ||||| | |||| | || ||||| || || || || ||||| || || || || Sbjct 23805 GCTCGAGATTTGTTTTATGCTCTTTGGATCCCCGATCTGTTTATGAAACGTGTGGAAGAC 23746 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802 ||||| | | |||||||| || |||| ||| | || | || | |||| Sbjct 23745 AACCAAGAATGGAGTTTATTCTGTCCGAACGAGGCTCCACGACTTTATGAGACA-TGGGG 23687 Query 75803 GAG-GAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGT 75861 || || ||||| || | || |||||| || | | ||| |||||| Sbjct 23686 AAGCGAATTTGATGCGTTATATGAAAAGTACGAGTCTCAAAACATTGCCCGAAAGACTGT 23627 Query 75862 ACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 |||| | | ||| || ||| | | |||| ||||| ||||| || || Sbjct 23626 CAAAGCCCAGCAATTGTGGTTTGCCATTTTGGATAGTCAGATTGAGACCGGAACGCCGTA 23567 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 |||||||||||| || |||||||| || || || ||||| | ||||| || Sbjct 23566 TATGCTTTACAAAGACGCTTGTAATCGTAAATCCAATCAGCAGAATCTTGGAACCATTC- 23508 Query 75982 GAGCTCAA---ATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038 | |||| |||| ||| ||||| | |||||| |||| | || ||| || Sbjct 23507 --GATCAAGCAATCTCTGCTGTGAAATCATCGAGTACTCAGACTCCAAAGAAGTGGCAGT 23450 Query 76039 TTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGA 76098 ||||||||||| || ||||| | |||| | ||| || | || | | | ||| | Sbjct 23449 ATGCAATTTGGCTTCCATCGCATTGTCAAAATTTGTGTATCA-GAAA---GAA--TTTCA 23396 Query 76099 TTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGA 76158 | || |||| | | ||||||||||| || ||||| |||||||| ||| | ||||||| Sbjct 23395 GTTTGCAAAATTATACGAAATCACAAAAATCGTTACGAAAAATCTCAACAAAATCATTGA 23336 Query 76159 CAGAAATTTTTATCCCGTTGAGACTG-CGCGAAAGT--CTAATATGCGACACAGACCTAT 76215 |||| |||||| || ||| || |||| ||| |||||| |||| || Sbjct 23335 TCTCAATTATTATCCGATT---CCTGAAGCACAAGTGAGCAATCAGCGACATCGACCGAT 23279 Query 76216 TGGTTTGGGTGTTCAAGGTCTCGCGGAT 76243 ||| | || ||||||||||| || ||| Sbjct 23278 TGGAATCGGCGTTCAAGGTCTTGCCGAT 23251 >seq835 Length=76541 Score = 140 bits (154), Expect = 4e-28 Identities = 303/449 (67%), Gaps = 6/449 (1%) Strand=Plus/Minus Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 || ||||||| | || || || || | |||| |||||||| | ||||||||| Sbjct 30251 GACAATGAAAGACACTTTATCAAACACGTGTTGGCCTTCTTTGCAGCCAGTGATGGAATT 30192 Query 64831 GTTTTTGAGAATATCAATAACAATTT-TGCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889 || ||| ||| || | ||||| || | ||| || ||||| |||||| || | Sbjct 30191 GTCAATGAAAATCTCGCCATGAATTTCAGCAG-TGAGGTTCAGATCCCCGAAGCTCGATG 30133 Query 64890 ATTCTACGCATATCAA--TGCCATAATGAAATGGTTCATGGCGAAACATATTCAAAATTG 64947 || |||| || |||| ||| ||| |||| | || ||| ||||| |||| Sbjct 30132 CTTTTACGGATTTCAAATTGCAATA--GAAAATATACACTCGGAAGTGTATTCGTTATTG 30075 Query 64948 ATTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTGAAGCCATCCAAACT 65007 ||||| | |||||| || ||| | ||||||| |||| ||| | || || |||| Sbjct 30074 ATTGATACATACATCAAAGATCCAACTGAAAAACAGCATTTACTGTGCGCGATTGAAACA 30015 Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGC 65067 | || || || || || || ||||||| ||||||||| || |||||| | | Sbjct 30014 ATCCCGTGCGTTACCAATAAAGCACAATGGGCGTTGAAATGGTGCGATCCAAAGTATGCC 29955 Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 || || || || | | | || |||||| || || || ||||| |||||||| ||| Sbjct 29954 TCGTTTGCAGAAAGAGTGGTAGCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCA 29895 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 |||||| |||| | |||| ||||||| || || | ||||| || || ||||| |||||| Sbjct 29894 TTCTGCTCTATATTTTGGCTGAAGAAACGAGGATTGATGCCTGGACTTTGCTTTTCAAAT 29835 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCA 65216 || || || || ||||| || || || Sbjct 29834 GAGCTCATCAGTCGTGATGAAGGACTACA 29806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596478548564800