Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq500 188 2e-42 seq1167 93.3 1e-13 seq1230 91.5 4e-13 seq7469 84.2 6e-11 >seq500 Length=28399 Score = 188 bits (208), Expect = 2e-42 Identities = 286/405 (71%), Gaps = 9/405 (2%) Strand=Plus/Plus Query 155973 TCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCC 156032 |||| || |||||||| ||||| || | || || ||||| | ||| ||||| Sbjct 23816 TCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATATCCGCATGCCAGGGCTCT 23875 Query 156033 AGATACATAGCAAAACTACCATTCCTCTTGCCACCC---TGATCTACATACCGAGCAGTC 156089 ||||| || |||||| || |||| ||| ||||| ||||| || || ||||| || Sbjct 23876 AGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCACCTTGATCAACGTATCGAGCTGTG 23935 Query 156090 TTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATA 156149 | |||||| || | ||||| |||| ||| ||||| ||| | ||||| || ||||||||| Sbjct 23936 TCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTTCCATTCGTCCCGCGAATA 23995 Query 156150 TGCGAACCA---GATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTA 156206 | ||| | ||||||| ||| |||| | |||||||| || | ||| || Sbjct 23996 T---AACTGTTGGTGGAGCGAATATTGGAAATACTGACGCCAATACCGCCAGCCCACTTT 24052 Query 156207 GAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATT 156266 ||||| || |||| || | || | | |||| || || ||||||||||||| ||| Sbjct 24053 GAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCATCTTGCATG 24112 Query 156267 GATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGT 156326 |||| |||| | ||||| |||||||||||| || ||||| || ||||| || || || Sbjct 24113 GATAATAGAAAACACGACGATAATTGAGGTCGAGGCGTTCCCGCATTGAAAAGCGTCGGA 24172 Query 156327 GTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCC 156371 |||||||| |||| |||| | ||||| | || || || ||| Sbjct 24173 GTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCC 24217 >seq1167 Length=25422 Score = 93.3 bits (102), Expect = 1e-13 Identities = 177/258 (69%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 251404 GCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGA-TGCGTCATATAG 251462 || |||| ||||| ||| ||| || || |||| ||| ||||| || | || || ||| Sbjct 6987 GCAATAATTCCACAGATATCACAAACGTGAACGCGGTACGCATCCGAATTCG-CAAATAA 6929 Query 251463 CCGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACC 251522 ||| || | ||| | || ||||||||||||| |||||| |||||||||||||| Sbjct 6928 TCGATCCATAAGGAAATTCGCTGATCCGTGTGAAATCAAACAATCTCGCTCCATTTCACC 6869 Query 251523 GAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCAT 251582 | ||| | || || || || || || ||||| || || || || || | || Sbjct 6868 CATACGTAACCCTCCTTCCCGGGCTCTTCCCTCCATCGGTTGTCGCGTTAGCATTGTCAC 6809 Query 251583 AGGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAA 251642 |||||| || || ||| ||||||| |||||||| || | ||||| ||||| Sbjct 6808 TGGACCGCGAGACCGCGAGTGTATTTTATCATCAACCATATGTTTTAACCGCTGATAGAA 6749 Query 251643 TGCGGGACCGATGAAGAT 251660 || || || ||||| || Sbjct 6748 TGTCGGTCCAATGAAAAT 6731 >seq1230 Length=22388 Score = 91.5 bits (100), Expect = 4e-13 Identities = 201/299 (67%), Gaps = 7/299 (2%) Strand=Plus/Minus Query 288964 TGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtt 289023 |||||||| || | ||| |||||||||||| |||| | | ||| | ||| ||| Sbjct 12023 TGATTAAGAGTGTTTTCTCTTTCATCATTTCCACCTGAGAACTGGCCC---TTGCTTCTT 11967 Query 289024 tttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCA 289083 | | |||||||||| || ||||| ||||| | | || || | ||| || || Sbjct 11966 GTGCGAGCAACAGCATCGATCTCGTCGATGAAGACAATGCAGGGCGCGTTTGCTCGAGCT 11907 Query 289084 ATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCA 289143 | ||| || |||| ||||| |||| || | || ||| |||| || | ||| || Sbjct 11906 TCTCGAAACAAGTCTCGCACACGTGATGGACCCACCCCCACAAACATCTCAATAAAATCG 11847 Query 289144 GAAGCG--GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAA 289201 ||| || |||||| || || | || | || || ||||| ||| ||||||||| Sbjct 11846 GAACCGGAGATACTGTAA--AACGGAACGCTGGCCTCTCCTGCAGTAGCCTTCGCCAGAA 11789 Query 289202 GTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCA 289260 | || || || ||||| ||||| || | | || |||| ||||| | |||||| ||| Sbjct 11788 GCGTTTTTCCGGTTCCTGGTGGACCAACAAGTAATGCTCCTTTTGGAATTTTTGCACCA 11730 >seq7469 Length=86738 Score = 84.2 bits (92), Expect = 6e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 353971 TGAGATATAATAATCACACCCCCAAGATAGCTCTTAATTGCTGTGGCGAGAGCACCAAGC 354030 || || || |||| ||||| ||| | || || ||| || | || |||||||| || Sbjct 63534 TGTGAGATCATAACAACACCTCCACCAAAGTTCACAATAGCGGCAGCAAGAGCACCCAGT 63475 Query 354031 GAGTCACGGTCGAGGAAATTAGTAGGTTCGTCAAGGATAAGAACGTGCGGCTCCATCCAC 354090 || || || || || |||| || ||||||||||||| | |||||| || || |||| Sbjct 63474 GAATCGCGATCCAGATAATTCGTTGGTTCGTCAAGGACTAAAACGTGAGGAAACAGCCAC 63415 Query 354091 ATTGCTGCAGCCAGAACTACCTTAACCTTCTGTCCGCCTGATAG 354134 || ||||| | || || | ||| || ||||| || || ||||| Sbjct 63414 ATGGCTGCTCCAAGGACCAACTTGACTTTCTGACCACCGGATAG 63371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471587347934770