Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2578 98.7 2e-14 seq835 98.7 2e-14 >seq2578 Length=36946 Score = 98.7 bits (108), Expect = 2e-14 Identities = 167/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 1485475 TTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATC 1485534 |||||||| || ||||| || || ||||||||||| |||||| ||| || ||| || Sbjct 7199 TTGGTGACTGCTTTGGTTCCTTCAGAGACGGCGTGTTTGGCCAATTCACCTGGCAGCATA 7258 Query 1485535 AGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGC--GCTTGTTAGTGCGCG 1485592 || || |||| || ||||| || || | ||| | || || || |||||| || | Sbjct 7259 AGTCGTACGGATGTTTGGATTTCACGACT--CGAAAGAGTAGCCTTCTGGTTAGTTCGTG 7316 Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652 || || || || ||| | || || || | || ||||||| ||| |||||||||| Sbjct 7317 ACAATTTTCCTGCTTCAGTGGCAATTCGTTCAAAAATATCGTTGATAAAAGAGTTCATGA 7376 Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAA 1485712 | ||||| | | || || || || || |||||||| || ||||||||||||| Sbjct 7377 TGGACATTGCGCGTCTTGAAATTCCAACTTCTGGGTGCACTTGGCGCAGCACCTTGTAAA 7436 >seq835 Length=76541 Score = 98.7 bits (108), Expect = 2e-14 Identities = 219/328 (67%), Gaps = 7/328 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||| || |||||||| | || || |||||| || || ||||| | || || ||| Sbjct 29812 CCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAATCCTCGTTTC 29871 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || |||||||| || | ||||| || ||||||||||| || |||||||| |||||| Sbjct 29872 TTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTCGACGGCCGCAAAG 29931 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTG--TTGATCCACTTCATCGCCC 794518 | || | | || ||||| | |||| ||||| | | ||| |||| ||||| Sbjct 29932 GCTACCACTCTTTCTGCAAA-----CGAGGCATACTTTGGATCGCACCATTTCAACGCCC 29986 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCT 794578 | | ||| || || | || | || | || || || |||| | | || | || | Sbjct 29987 ATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCACAGTAAATGCTGTTTTT 30046 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 | || || |||| ||| || || || | | ||| || || ||||| || |||| Sbjct 30047 CAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGTGTATATTTT 30106 Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCA 794666 | || || || || || || |||||||| Sbjct 30107 CTATTGCAATTTGAAATCCGTAAAAGCA 30134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914947566610190