Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq835 129 8e-24 >seq835 Length=76541 Score = 129 bits (142), Expect = 8e-24 Identities = 391/592 (66%), Gaps = 14/592 (2%) Strand=Plus/Minus Query 1455725 CTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCG-CTACCAGCGGATATGGGA 1455783 || || || || ||||||||||||||| | || || || | | | | | | || ||||| Sbjct 30395 CTTCGAGAAAATCCGAACCGCTTTGTCTTATTTCCGATACAACAATCTGAG-ATTTGGGA 30337 Query 1455784 AATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCC- 1455842 ||||| | |||| | ||||| |||||||||||| || || |||| | || || Sbjct 30336 CATGTATAAGAAAG-CAGAGGCAAGCTTTTGGACCGCAGAAGAAATCGATTT-GGTGCAT 30279 Query 1455843 GACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTC 1455902 |||| | ||||| | | ||| | || | || || ||||| ||||| | Sbjct 30278 GACATGAATGACTGGCTTAATATATCGGACAATGAAAGACACTTTATCAAACACGTGTTG 30219 Query 1455903 GCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAA 1455962 ||||| ||| || ||||| ||||| || || || || || ||| || | | Sbjct 30218 GCCTTCTTT-GCAGCCAGTGATGGAATTGTCAATGAAAATCTCGCCATGAATTTCAGCAG 30160 Query 1455963 AGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACAT 1456022 ||||| || | || || || || | |||||||| || || || || || ||||| || Sbjct 30159 TGAGGTTCAGATCCCCGAAGCTCGATGCTTTTACGGATTTCAAATTGCAATAGAAAATAT 30100 Query 1456023 CCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGA 1456082 ||||| ||| || ||| | |||| || || ||| |||| || || || || | Sbjct 30099 ACACTCGGAAGTGTATTCGTTATTGATTGATACATACATCAAAGATCCAACTGAAAAACA 30040 Query 1456083 CCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGAT 1456142 || | | |||| || || || | |||| || | || || || | |||||| | Sbjct 30039 GCATTTACTGTGCGCGATTGAAACAATCCCGTGCGTTACCAATAAAGCACAATGGGCGTT 29980 Query 1456143 GAAGTGGATCAA--CAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG 1456200 ||| ||| | | ||| | |||||| ||||| || | | || | |||||| | Sbjct 29979 GAAATGGTGCGATCCAAAGTATGCCTCG----TTTGCAGAAAGAGTGGTAGCCTTTGCGG 29924 Query 1456201 C-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCG 1456259 | ||||| || ||||||||||| || |||||| | || |||||||| ||||| || | Sbjct 29923 CCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGCTCTATATTTTGGCTGAAGAAACGAG 29864 Query 1456260 GCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAG 1456311 | | ||||| || ||| |||||| || || | |||||||| || |||| Sbjct 29863 GATTGATGCCTGGACTT-TGCTTTTCAAATGAGCTCATCAGTCGTGATGAAG 29813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176633523058020