Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq378 127 2e-24 seq2154 105 6e-18 seq7101 84.2 2e-11 >seq378 Length=86116 Score = 127 bits (140), Expect = 2e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | | |||||| || ||||| || || || ||||||||||| | Sbjct 295 TTCCACCACGAAGACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCG 236 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | | ||||| |||| || || || ||||| || || |||| || ||||| || | || Sbjct 235 CAAGCGTTCGTCCGTCTTCTAGTTGTTTACCGGCGAAGATCAGACGTTGCTGATCAGGAG 176 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACC-GTGTCGCTCGATTCC 35686 ||| | ||||||||| |||||| ||||| |||| || ||||| || || Sbjct 175 GAATTCCTTCCTTGTCCTGGATCTTCGCCTTCAC-GTTGTCAATAGTGTCTGATGACTCG 117 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || |||| || || ||||| || ||||| |||||||||||||||||||||| Sbjct 116 ACTTCCAAAGTTATAGTTTTTCCAGTCAAGGTTTTCACAAATATCTGCATTC 65 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||| ||| | |||| ||| || |||||||||||||| || Sbjct 521 CCACCACGAAGACGAAGTACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGCA 462 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| ||||| || ||||| ||||| || | || |||||||| | |||| Sbjct 461 AGCGTGCGTCCGTCTTCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGA 402 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | || |||||| |||||| ||||| | | | | || || |||||||| Sbjct 401 ATTCCTTCTTTGTCCTGGATCTTCGCCTTCACATTGTCGATAGTATCTGAAGATTCCACT 342 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||| ||| || ||||| || |||| || || ||||| || ||||||| Sbjct 341 TCCAACGTAATAGTTTTCCCAGTCAGCGTCTTAACAAAAATTTGCATTC 293 >seq2154 Length=27549 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35549 TTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATC 35608 ||||| ||||||||||| || | ||||| |||| |||| || || || || || ||| Sbjct 4271 TTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAATC 4212 Query 35609 AACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC 35668 || ||||| ||||| | ||||| | |||||||| ||||| ||||| | | | Sbjct 4211 AAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTATCG 4152 Query 35669 ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAAT 35728 | ||||||| ||||| ||||| | ||||| ||||| || || | || || || || Sbjct 4151 ATCGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTCTTGACGAAA 4092 Query 35729 ATCTGCATTCT 35739 ||||||||||| Sbjct 4091 ATCTGCATTCT 4081 >seq7101 Length=52731 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||||||||| | | |||| ||||||||| || || || || ||||||||||| || Sbjct 35533 CCACCACGTAATCGTAGAACCAGATGTAACGTGCTTTCTTTCTGGATGTTGTAATCCGCT 35592 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || ||||| | || |||| || || || ||||| || | ||||| ||||||| ||| Sbjct 35593 AATGTTCGACCATCTTCCAATTGTTTCCCAGCAAAAATGAGACGCTGTTGGTCCGGGGGA 35652 Query 35630 A 35630 | Sbjct 35653 A 35653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450724797626800