Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq500 300 2e-76 seq835 298 8e-76 >seq500 Length=28399 Score = 300 bits (332), Expect = 2e-76 Identities = 1189/1852 (64%), Gaps = 44/1852 (2%) Strand=Plus/Plus Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462 ||| || ||||||||||| || ||||| |||||| ||||| ||||||||||||| Sbjct 22555 TGTTCGGAGATAGTACATTCCTGTTTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGA 22614 Query 68463 TGTTAGTTTGGAATAAC--TTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCG 68520 || ||||| | | || | || ||||| || |||||||| | |||||||| ||| Sbjct 22615 AGTGAGTTT--ACTGACAGTCGGGTCGGCAATGTGAATATTAAGTGATTGACTCTGACAA 22672 Query 68521 ATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATA 68580 ||| | ||||||| ||| || ||||| | | ||| |||||| |||||||||| Sbjct 22673 ATGTACGCTCCTCGATCGGCAGCCATGTCCAAAATCGCCTTTTGCTTGATTTCCCAAACT 22732 Query 68581 GTCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCG---TATTTTGAATGGATCCACCA 68637 || || | | | ||| | || | |||| | ||||||| | ||| || | | Sbjct 22733 GTTTTGTACTTTTCTTTCACATGAGGCGGAATTTCAGCGATATTTTGTACGGAACCGCGA 22792 Query 68638 TCGGATATAATTATATTCTTGATCTCATCAT-TCCACAATTTTCTCTCCGTTAAAACTCT 68696 ||| | ||| |||| | || | || ||||||| || |||| | || |||| Sbjct 22793 TCGCGAAGGATTTGATTCCGAACGTC-TGATGTCCACAAATTCATCTCAAT--AAGCTCT 22849 Query 68697 A--AGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATA 68754 | ||||| || || ||| |||||| |||| | || | ||| || | || Sbjct 22850 TCCATGAGATATTTGTTGACAATTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATG 22909 Query 68755 TTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTT 68814 || || | || || | ||| || ||| || ||||||||||| ||||| || ||| Sbjct 22910 TTGGAAGTGAACGGCTCGATAGACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTT 22969 Query 68815 GGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGA 68874 ||||| || || | || ||| |||| | || || || | || ||||| | Sbjct 22970 GGCATCGGAGCGAGCAGCAAAGAGTTTCGGATTCCGTGAGTAGCTACTTGCTCTTTCAAC 23029 Query 68875 TGTTTCCAATCCCAAAGATCAGAT---GGTACAACATTCCAAAGATCGTATTGTAGAATT 68931 || ||||||||||| || | || || | || | ||| | ||| |||| | || Sbjct 23030 TGCTTCCAATCCCATCGACCGGAATCGGGAATGACCTGCCACATATCAAATTGAAAGATA 23089 Query 68932 CCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCC---TTCCTGTTCAGCTAGT 68988 || ||| | ||||||| ||| | || || ||||| |||| || || | | Sbjct 23090 CCTCGACTAACTGGTGATCCAGCATAGCTCTCGTACGGTCCGAGTTCCCGT---GCCAAT 23146 Query 68989 TCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCT 69048 || || || | || || |||| || ||||| ||||| | || ||||| || Sbjct 23147 TCCATGGAAGCTTCCATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCG 23206 Query 69049 TGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGA 69108 | || || || || |||||| | | || | ||| | ||| || | || ||| Sbjct 23207 CGAGCAGCTTTGCTTTCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGA 23266 Query 69109 ACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAA 69168 || || || || || |||| ||||| || ||| || ||||| ||||| |||||| Sbjct 23267 ACGCCGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGCTTCAGGAATCGGATAA 23326 Query 69169 TAATTAATATCTATAATTTTATTAAGATTT--CGGACTACTACTTTAACCACGTCCTTTA 69226 ||||| | ||| || ||||| || |||||| || | || | ||| | || | || Sbjct 23327 TAATTGAGATCAATGATTTTGTTGAGATTTTTCGTA--ACGATTTTTGTGATTTCGTATA 23384 Query 69227 GTTTGAGAAAATCAAATCGTCCATCTATAACAAACATATT--CAGTGCTACAGATGCTAG 69284 ||| ||| | |||| || ||| ||| | || || || ||| | || || | Sbjct 23385 ATTTTGCAAACTGAAAT--TCTTTCTGATACACAAATTTTGACAATGCGATGGAAGCCAA 23442 Query 69285 ATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACT 69344 ||| || ||||| || || || || | || || | || || || || ||||| || Sbjct 23443 ATTGCATACTGCCACTTCTTTGGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTGCT 23502 Query 69345 ACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAG 69404 || || || || ||||| |||||||| || ||||| ||||| |||||||| Sbjct 23503 TGATCGAATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAAAG 23562 Query 69405 AATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGC 69464 ||| |||| || || || ||||||||| || | ||| | ||||| || | || Sbjct 23563 CATATACGGCGTTCCGGTCTCAATCTGACTATCCAAAATGG-----CAAACCACAATTGC 23617 Query 69465 ATTTATT--ACGGTCTT----GTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTC 69518 || || ||||| | || | || | || || | | ||||| | || Sbjct 23618 TGGGCTTTGACAGTCTTTCGGGCAATGTTT-TGAGACTCGTACTTTTCATATAACGCATC 23676 Query 69519 GAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCA 69578 ||||| |||||| |||| | || ||| || || ||||| | || ||| Sbjct 23677 AAATTCGCTTCCCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCA 23736 Query 69579 CACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAG 69638 | | | || | || ||||||||||| |||||||| ||||||||||| ||| | Sbjct 23737 TTCTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAACAA 23796 Query 69639 ATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAAT 69698 ||||| | || || ||||||||| ||| || || || |||||||| | || Sbjct 23797 ATCTCGAGCTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGAT 23856 Query 69699 ATCAGAATGCCATGGTTCTAGATATATCGC-CATGACTCCCGGTCGTTTATTTCCTCCCT 69757 ||| | |||||| || |||||||| || || | ||| || || || || || | Sbjct 23857 ATCCGCATGCCAGGGCTCTAGATAAATTGCAAAAGAC-CCTTTCCGCTTCCCACCACCTT 23915 Query 69758 GATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATT 69817 |||| | ||||| || |||| ||| | || | ||||| |||| ||| ||||| || Sbjct 23916 GATCAACGTATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAAC 23975 Query 69818 TACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTA 69877 | ||||| || || ||||||||| | | ||||||||| |||| | || | Sbjct 23976 TTCCATTCGTCCCGCGAATATAACTGTTGGTGGAGCGAATATTGGAAATACTGACGCCAA 24035 Query 69878 TTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTA 69937 | || || ||| || || || ||||| |||||| ||||| || || || || | Sbjct 24036 TACCGCCAGCCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGA 24095 Query 69938 TGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCG 69997 | ||||||| |||| | |||||||| || | |||| | | ||||||| Sbjct 24096 TAGAATCATCTTGCATGGATAATAGAAAACACGACGATAATTGAGGTCGAGGCGTTCCCG 24155 Query 69998 CATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTT 70057 |||| || | || |||| ||| || || || | |||| || | | | || |||| Sbjct 24156 CATTGAAAAGCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTT 24215 Query 70058 CAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCT 70117 | | | | | || | || | | || || || | || || ||||| | |||||| | Sbjct 24216 CCAAAACGGCATCCAAATTCTCTTTGTGTATGCCGACAGCCACTCGCATTATCATATGTT 24275 Query 70118 GAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAA 70177 | || ||||| | ||| ||| | |||||| || ||||| ||||||||||||| Sbjct 24276 GTGGGCGTTCACACACTTTTCCATTCACACGCAACAGATACGATTTCTCCAGAGTTTTAA 24335 Query 70178 ACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAG 70229 | |||||||||| ||| ||||||||| || ||||| | ||||| || Sbjct 24336 AGCCAAAATAGTCGTAATCAAAGTCTCTATCACCGATAATGGCGGAATTGAG 24387 >seq835 Length=76541 Score = 298 bits (330), Expect = 8e-76 Identities = 625/915 (68%), Gaps = 35/915 (4%) Strand=Plus/Plus Query 39332 TATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATG 39391 ||||| |||||||||||||| ||||| || ||||| |||| || ||||| | ||||| Sbjct 29506 TATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGATATCATATCCATC 29565 Query 39392 AAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTC-TGAAATCAATCT 39450 | ||||| ||||||| || | |||| || | | || | | | || || ||||| Sbjct 29566 CAGTCAAAGGGATTAGAAGCTTGATATAACTTGCTGACGCCAAGTGCATGTAA-CAATCG 29624 Query 39451 ATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAAC 39510 ||| || ||||| || |||||| ||||| |||||||||| || || | || Sbjct 29625 ATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGAC 29684 Query 39511 TGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCG-ATG 39569 ||| || | || || ||| |||| ||||||| ||||| || | || || | ||| Sbjct 29685 TGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAATGATTGCATG 29744 Query 39570 TTACTACCTCATCACTCGGTGGATGCAA---TAAATGTTTAAA---CATTAAGCAGGCGA 39623 | || | | || |||| || || |||| | ||| | || || | Sbjct 29745 --AATAGAGCCT---TC--TGGAAGCTTATTTACCAGTTTCGAGTACATCAGACATGCAA 29797 Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683 ||||||||||||| || ||||| | ||| || | || || ||||| |||||||||| Sbjct 29798 AGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCA 29857 Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAA-GATCCAGAAAAGAAGATGCCT 39742 | | || || || || ||||||||||| | |||| || ||||| || || ||||| ||| Sbjct 29858 TCAATCCTCGTTTCTTCAGCCAAAATATAG-AGCAGAATGATCCGGAGAAAAAGATTCCT 29916 Query 39743 TCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTATC----CA 39798 || || || ||||| || || | ||| ||| | | | || || || ||| || Sbjct 29917 TCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTT-TGGATCGCACCA 29975 Query 39799 CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 39858 ||| ||||| | ||||| || | || || || |||||||| || || | | Sbjct 29976 TTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCACAGTAA 30035 Query 39859 ATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGA 39918 || ||||||||| |||||| | |||||||| || || | ||||| ||| || Sbjct 30036 ATGCTGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGA 30095 Query 39919 ATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTAC 39978 || || ||||| || || || |||||||||||||| |||| ||||| | || || || Sbjct 30096 GTGTATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGAAC 30155 Query 39979 CTC--TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAA 40036 ||| || ||| || | || | ||||||||| || ||||||||||| || ||||| Sbjct 30156 CTCACTGCTGAAATTCATGGCG--AGATTTTCATTGACAATTCCATCACTGGCTGCAAAG 30213 Query 40037 AATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGT-CAATTTATT---CCAGTC 40092 || ||||| || ||||| ||||| | | |||||| ||| | || |||| |||||| Sbjct 30214 AAGGCCAACACGTGTTTGATAAAGTGTCTTTCAT----TGTCCGATATATTAAGCCAGTC 30269 Query 40093 ATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTT 40152 ||| || || | | ||| | |||||| || |||||||| |||||||| || || Sbjct 30270 ATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTT 30329 Query 40153 GTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGATTTTT 40212 ||||||| ||| || ||| | |||||| ||||| | ||||| | || ||||||| Sbjct 30330 ATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGGTTCGGATTTTC 30389 Query 40213 TGCAAGGATGGGTTC 40227 | ||| | ||||| Sbjct 30390 TCGAAGAAAAGGTTC 30404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686803960544400