Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq835 114 2e-20 seq500 104 3e-17 >seq835 Length=76541 Score = 114 bits (126), Expect = 2e-20 Identities = 269/399 (67%), Gaps = 8/399 (2%) Strand=Plus/Plus Query 130028 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 130087 || || || || ||||| |||||| ||||| || ||||| || || ||||| | || Sbjct 29806 TGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAATCCT 29865 Query 130088 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 130147 || ||||||| ||| || || | || ||||| || ||||| ||||| || || || | Sbjct 29866 CGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTCGACGGCC 29925 Query 130148 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCC 130207 || || || | | | || ||||| ||| |||||| ||| |||| |||| |||| Sbjct 29926 GCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCACCATTTCAACGCC 29985 Query 130208 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAG-AGTTCCTTCTT 130266 || || || || || | ||||||| || | ||||| || || | | || || Sbjct 29986 CATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCG-CACAGTAAATGCTGTTT 30044 Query 130267 TTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCAT 130326 ||| | ||||||||||||||| |||| || | | ||||| ||| || | | Sbjct 30045 TTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGTGTATATT 30104 Query 130327 TTCATTATGGCA--CTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCT 130384 ||| ||| ||| ||| | |||| || | || |||||| ||||| |||||| || Sbjct 30105 TTC--TATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGAACCTCA-CT 30161 Query 130385 GC-AAAATTGTTATTGATATTCTCAAAAACAATTCCATC 130422 || ||||| | || ||| ||| ||||||||||| Sbjct 30162 GCTGAAATTCATGGCGAGATTTTCATTGACAATTCCATC 30200 >seq500 Length=28399 Score = 104 bits (114), Expect = 3e-17 Identities = 314/481 (65%), Gaps = 7/481 (1%) Strand=Plus/Plus Query 119028 TCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAG 119087 || || || || ||||| || || || |||||||| || || | || | ||| ||| Sbjct 23747 TCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAACAAATCTCGAGCT 23806 Query 119088 CGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGC 119147 ||| ||||| || ||||| ||| | |||| ||| || | ||||||||| ||| Sbjct 23807 CGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATATCCGCATGC 23866 Query 119148 CACGGTTCCAGGTACACCGCGATTGACCCCTTACGA---CGACCAGCCTGGTTTACATAC 119204 || || || || || | || | ||||| || || | |||| | || | || || Sbjct 23867 CAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCACCTTGATCAACGTAT 23926 Query 119205 CTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTC 119264 | || ||| | || || || ||||||||||||| || |||| || ||||| ||| Sbjct 23927 CGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTTCCATTCGTC 23986 Query 119265 CCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGC--ATACCAATACCCCCTG 119322 || |||||| | || ||| | || || |||| | | | |||||||| || | Sbjct 23987 CCGCGAATATAACTGTTGGTGGAGC-GA-ATATTGGAAATACTGACGCCAATACCGCCAG 24044 Query 119323 CCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCAC 119382 |||||||||| || ||| || | | || || |||| || || ||||| || ||| Sbjct 24045 CCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCAT 24104 Query 119383 CCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGA 119442 | | | | | || || || ||| | |||||| | || || || || ||||| | Sbjct 24105 CTTGCATGGATAATAGAAAACACGACGATAATTGAGGTCGAGGCGTTCCCGCATTGAAAA 24164 Query 119443 GAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGG 119502 | || || || || || | || | ||| ||||| | || || || ||||| |||| Sbjct 24165 GCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCCAAAACGG 24224 Query 119503 C 119503 | Sbjct 24225 C 24225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618340811327600