Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq500 152 6e-32 >seq500 Length=28399 Score = 152 bits (168), Expect = 6e-32 Identities = 1115/1770 (63%), Gaps = 94/1770 (5%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 |||||| | ||| | ||||| ||||| |||| || || || | | ||| | || Sbjct 24280 CCCACAACATATGATAATGCGAGTGGCTGTCGGCATACACAAAGAGAATTTGGATGCCGT 24221 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATT---CACGCAACACCAACCCT 104337 ||||| || || || | ||||| ||| | |||| || || ||||| || || || Sbjct 24220 TTTGGAAACGTATGAACACATGTCACAA---AAGTTCTTTACGCATGCAACTCCGACGCT 24164 Query 104338 CTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGA 104397 |||||||| || || || |||| ||| | || || || || | ||| | || Sbjct 24163 TTTCAATGCGGGAACGCCTCGACCTCAATTATCGTCGTGTTTTCTATTATCCATGCAAGA 24104 Query 104398 GGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGC 104457 || || ||| |||| || || | || || | | |||||| || ||||||||||| Sbjct 24103 TGATTCTATCGACGGCATTTACGACACGCTGAAACAATGTGCGTGTATTTCAAAGTGGGC 24044 Query 104458 TGGGGGTATTGGGAT--GCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 104515 ||| |||||||| | | | |||| || | | ||| || | |||||| ||| Sbjct 24043 TGGCGGTATTGGCGTCAGTATTTCCA--ATATTCGCTCCACCAACAGTTATATTCGCGGG 23986 Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575 || ||||| || |||| ||| ||||||||||||| || || || | |||||| || Sbjct 23985 ACGAATGGAAGTTCGAATGGAATTGTTCCAATGCTTCGGGTGTTCAATGACACAGCTCGA 23926 Query 104576 TATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCA 104629 || || |||||| ||| ||| ||||||| ||| | ||| | ||||| ||||| Sbjct 23925 TACGTTGATCAAGGTGGTGGGAAGCG--GAAAGGG-TCTTTTGCAATTTATCTAGAGCCC 23869 Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCG 104689 ||||| ||||||||| | ||||| || || | ||| || || || | || Sbjct 23868 TGGCATGCGGATATCTTTGAGTTTCTGGAACTACGTAAGAATCATGGAAATGAACTCCAT 23809 Query 104690 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749 || || ||| | || | ||||| ||||| || ||||| || ||||| | || || Sbjct 23808 CGAGCTCGAGATTTGTTTTATGCTCTTTGGATCCCCGATCTGTTTATGAAACGTGTGGAA 23749 Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809 || | | ||| | | || ||||| || |||| || | || | || | | || Sbjct 23748 GACAACCAAGAATGGAGTTTATTCTGTCCGAACGAGGCTCCACGACTTTATGA-GACATG 23690 Query 104810 GGTGAG-GAGTTTGAAGCCCTTTACACAAAGTACGAG--GAAGAAGGTCGGGCGACTGCG 104866 || || || ||||| || | || |||||||||| | || | | ||| | Sbjct 23689 GGGAAGCGAATTTGATGCGTTATATGAAAAGTACGAGTCTCAAAACATTGCCCGA--AAG 23632 Query 104867 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926 || || ||| | ||||| || ||| | | ||| | ||||| || || Sbjct 23631 ACTGTCAAAGCCCAGCAATTGTGGTTTGCCATTTTGGATAGTCAGATTGAGACCGGAACG 23572 Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAAT-TTGG---- 104981 || || ||||||||||||||||| ||||| | || ||||| ||||| |||| Sbjct 23571 CCGTATATGCTTTACAAAGACGCTTGTAATCGTAAATCCAATCAGCAGAATCTTGGAACC 23512 Query 104982 GTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGA---CAAAGATG 105038 | ||||||| ||||||||| |||||| | || | |||| |||||| | Sbjct 23511 ATTCGATCAAG-----CAATCTCTGCTGTGAAATCATCGAGTACTCAGACTCCAAAGAAG 23457 Query 105039 AGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAA 105098 ||| || || || | || || ||||| | | || | |||| ||| | || Sbjct 23456 ---TGGCAGTATGCAATTTGGCTTCCATCGCATTGTCAAAATTTGTGTATC-----AGAA 23405 Query 105099 AGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACA 105158 ||| |||| | | || |||| | ||||| | || |||| || || ||||| || |||| Sbjct 23404 AGA-ATTTCAGTTTGCAAAATTATACGAAATCACAAAAATCGTTACGAAAAATCTCAACA 23346 Query 105159 GAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTC--GTAAATCTAATATGAGACA 105216 | | |||||| |||| ||| || || || | || | ||| | |||| Sbjct 23345 AAATCATTGATCTCAATTATTATCCGATTCCTGAAGCACAAGTGA--GCAATCAGCGACA 23288 Query 105217 CCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGAT--GTATTCA-TTCTTTGTCGCCA 105273 || || ||||| |||| ||||| ||||| || ||| || || | | | ||| | Sbjct 23287 TCGACCGATTGGAATCGGCGTTCAAGGTCTTGCCGATACGTTTTTACTGATGAGTCTTC- 23229 Query 105274 CGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCA 105333 ||||||| | | | || || |||| || ||||| || |||||| Sbjct 23228 --CATTTGAAAGCAAAGCTGCTCGCGAGCTCAACAAAGAAATTTTTGAAACGATGTATTT 23171 Query 105334 CGCCGCTCTTGAGGCGAGTTCA--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTT 105391 ||| || | || || | || || |||||| || || || || || | || | Sbjct 23170 CGCGGCGATGGAAGC--TTCCATGGAATTGGCACGGGAACTCGGACCGTACGAGAGCTAT 23113 Query 105392 GAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG 105451 | || || |||| | | ||| | ||||||||||||||| || |||| | || | Sbjct 23112 GCTGGATCACCAGTTAGTCGAGGTATCTTTCAATTTGATATGT-GGCAGGTCATTCC-CG 23055 Query 105452 CTTCACTACGA----CTGGGAAGCTCTCAAGGAACGCATCAAGGAG-----AAGGGTCTT 105502 ||| ||| | |||||| | ||| | | |||| || | || | Sbjct 23054 ATTCCGGTCGATGGGATTGGAAGCAGT---TGAAAG-AGCAAGTAGCTACTCACGGAATC 22999 Query 105503 CGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAAT 105562 || ||| | | || | ||||| |||||||| ||||| || || ||||| | || ||| Sbjct 22998 CGAAACTCTTTGCTGCTCGCTCCGATGCCAACCGCCTCAACGGCTCAAATTCTCGGCAAT 22939 Query 105563 AATGAATGCTTTGAACCCTACACGACGAACA---TCTATCTGAGAAGAACCCTCGCGGGA 105619 || | | || || | ||| | |||| || ||| || | |||||| ||| Sbjct 22938 TGCGAGTCTATCGAGCCGTTCACTTCCAACATGTTCAATC---GACGCGTCCTCGCTGGA 22882 Query 105620 GAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGG--- 105676 || ||| ||||||||||| ||||| |||| || || | ||||| | | ||| Sbjct 22881 GAATTTACAATTGTCAACAAATATCTCATGGAAGAGCTTATTGAGATGAATTTGTGGACA 22822 Query 105677 TCCAAGGATATGAAGGATCT-CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGA 105735 || | | | ||| | | | | | || || |||||| | |||||||| | || Sbjct 22821 TCAGACGTTCGGAATCAAATCCTTCGCGATCGC----GGTTCCGTACAAAATATCGCTGA 22766 Query 105736 TATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGT 105795 ||||| | | | || | |||| |||||||||||||||||| |||| | Sbjct 22765 AATTCCGCCTCATGTGAAAGAAAAGTACAAAACAGTTTGGGAAATCAAGCAAAAGGCGAT 22706 Query 105796 CATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTT 105855 | |||||||| || ||||| || | |||| ||| |||||| | ||| | Sbjct 22705 TTTGGACATGGCTGCCGATCGAGGAGCGTACATTTGTCAGAGTCAATCACTTAATATTCA 22646 Query 105856 CATGGAAAGTCCAACGATGTC--CAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAG 105913 ||| | || || |||| || ||| |||| ||||| | ||| ||||| || Sbjct 22645 CATTGCCGACCCGAC--TGTCAGTAAACTCACTTCGATGCATTTCTACGCATGGAAAAAA 22588 Query 105914 GGTCTCAAAACGGGGATGTATTACCTCCGA 105943 ||||||||||| || ||||| || |||||| Sbjct 22587 GGTCTCAAAACAGGAATGTACTATCTCCGA 22558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583171779820400