Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq835 212 5e-50 >seq835 Length=76541 Score = 212 bits (234), Expect = 5e-50 Identities = 598/903 (66%), Gaps = 18/903 (2%) Strand=Plus/Plus Query 4244 ACAAACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTC 4303 || ||||||| |||| ||||| || || || || || || || ||||| |||| Sbjct 29487 ACCAACACCAGATTTCGCATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTG 29546 Query 4304 TAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACT 4362 | || || | ||||| | ||||| ||||||| || | || | || | || | Sbjct 29547 CAGAGATATCATATCCATCCAGTCAAAGGGATTAGAAGCTTGATATAACTTGCTGACGCC 29606 Query 4363 TTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGT 4422 || || | |||||| || || ||||| || || || || | ||| | | | Sbjct 29607 A-AGTGCATGTAACAATCGATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAAT 29665 Query 4423 TAATTCCAATTAATCTC-ACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACG 4481 | |||||||||| ||| || || || | | | | ||| |||||||| || | ||| Sbjct 29666 TCATTCCAATTAG-CTCGACTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACG 29724 Query 4482 GCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAA-A 4540 || || | || || | | || ||| | | |||||||| | || || | | Sbjct 29725 GCGTCGGAAATGATTGCATGAATAGAGCCTTCTGGAAGCTTATTTACCA-GTTTCGAGTA 29783 Query 4541 CAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAA 4600 || | ||| ||||| |||||||| | ||||| || | || || || || || ||||| Sbjct 29784 CATCAGACATGCAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAA 29843 Query 4601 CGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGA 4660 | ||| ||||| || |||| || || ||||||||||||| | ||||| || || Sbjct 29844 GCAAAGTCCAGGCATCAATCCTCGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGA 29903 Query 4661 AAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAG-CTGGCTT 4719 || || || ||||| ||||| ||||| ||||| | || | |||||| | ||| Sbjct 29904 GAAAAAGATTCCTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTT 29963 Query 4720 TGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATA 4779 || | | |||||| || ||||| | ||||| || |||||||||| ||||| | | Sbjct 29964 TGGATCGCA-CCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAA 30022 Query 4780 TAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839 | ||| | ||| | ||||||| ||| |||| || || || || || | || Sbjct 30023 TCGCGCACAGTAAATGCTGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAACG 30082 Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899 ||||| ||| || |||||||||||||| ||||| ||||||||||||||||||| ||||| Sbjct 30083 AATACACTTCCGAGTGTATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGCTT 30142 Query 4900 CTGTTACTTGAACTTCGTTAC--AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTC 4957 | | | ||||| || | | ||| || | | | ||||| || || || || || Sbjct 30143 CGGGGATCTGAACCTCACTGCTGAAATTCAT--GGCGAGATTTTCATTGACAATTCCATC 30200 Query 4958 ACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGT-ACTGT--TCGTCAGGCTTAAG 5014 |||||||||||| || ||||| || || ||||||| || | | ||| | || Sbjct 30201 ACTGGCTGCAAAGAAGGCCAACACGTGTTTGATAAAGTGTCTTTCATTGTCCGATATA-- 30258 Query 5015 TTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGC 5074 || ||||| || || | ||||| | |||||| | |||||||| || Sbjct 30259 -TTAAGCCAGTCATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGC 30317 Query 5075 TTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 || ||||| || ||||| |||||| |||| | || ||||||| || |||||| | Sbjct 30318 CTCTGCTTTCTTATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCG 30377 Query 5135 GTT 5137 ||| Sbjct 30378 GTT 30380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426986051015930