Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq500 347 2e-90 seq835 282 6e-71 >seq500 Length=28399 Score = 347 bits (384), Expect = 2e-90 Identities = 1446/2254 (64%), Gaps = 56/2254 (2%) Strand=Plus/Plus Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870 ||| || ||||||||||| || ||||| ||||| ||||| ||||||||||||| Sbjct 22555 TGTTCGGAGATAGTACATTCCTGTTTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGA 22614 Query 76871 TGTCAGTTTGGAATAAC--TAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCG 76928 || ||||| | | || | || ||||| || |||||||| | || ||||| ||| Sbjct 22615 AGTGAGTTT--ACTGACAGTCGGGTCGGCAATGTGAATATTAAGTGATTGACTCTGACAA 22672 Query 76929 ATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATA 76988 ||| | ||||||| ||| || ||||| | | ||| | |||||| |||||||||| Sbjct 22673 ATGTACGCTCCTCGATCGGCAGCCATGTCCAAAATCGCCTTTTGCTTGATTTCCCAAACT 22732 Query 76989 GTTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCA 77045 |||||| | || ||| | || | |||| | | ||||||| | |||||| | | Sbjct 22733 GTTTTGTACTTTTCTTTCACATGAGGCGGAATTTCAGCGATATTTTGTACGGAACCGCGA 22792 Query 77046 TCTGATATAATTGTATTCTTTATATCATCAT-TCCACAATTTCCTCTCTGTTAAAACTCT 77104 || | ||| |||| | || | || ||||||| ||| |||| | || |||| Sbjct 22793 TCGCGAAGGATTTGATTCCGAACGTC-TGATGTCCACAAATTCATCTCAAT--AAGCTCT 22849 Query 77105 A--AGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATA 77162 | ||||| || || ||| ||||||||||| | || | ||| || | || Sbjct 22850 TCCATGAGATATTTGTTGACAATTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATG 22909 Query 77163 TTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTT 77222 || || | || || | ||| || || || | ||||||||| || || || ||| Sbjct 22910 TTGGAAGTGAACGGCTCGATAGACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTT 22969 Query 77223 GGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGA 77282 ||||| || || | || ||| |||| || || || || | || ||||| | Sbjct 22970 GGCATCGGAGCGAGCAGCAAAGAGTTTCGGATTCCGTGAGTAGCTACTTGCTCTTTCAAC 23029 Query 77283 TATTTCCAATCCCAAAGATCTGAA---GGTACAACATCCCAAAGATCGTATTGTAGAATT 77339 | ||||||||||| || | ||| || | || | ||| | ||| |||| | || Sbjct 23030 TGCTTCCAATCCCATCGACCGGAATCGGGAATGACCTGCCACATATCAAATTGAAAGATA 23089 Query 77340 CCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAG--CTAGTT 77397 || |||| | ||||||| ||| | || || ||||| ||| | | | | || Sbjct 23090 CCTCGACTAACTGGTGATCCAGCATAGCTCTCGTACGGTCCGA--GTTCCCGTGCCAATT 23147 Query 77398 CACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTT 77457 | ||||||| || || |||| || ||||| ||||| | || ||||| || Sbjct 23148 CCATGGAAGCTTCCATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGC 23207 Query 77458 GTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAA 77517 | || | | || ||||| ||| | | || | ||| | ||| || | || |||| Sbjct 23208 GAGCAGCTTTGCTTTCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGAA 23267 Query 77518 CTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAAT 77577 | || || ||||| |||| ||||| || |||| | || ||||| ||||| ||||||| Sbjct 23268 CGCCGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGCTTCAGGAATCGGATAAT 23327 Query 77578 AATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTT 77637 |||| | || || ||||| ||||||||| | ||| | ||| | || | || || Sbjct 23328 AATTGAGATCAATGATTTTGTTGAGATTTTTCGTAACGATTTTTGTGATTTCGTATAATT 23387 Query 77638 TAAGAAAATCAAATCTTCCATCTATAACAAACATGTT--CAAAGCTATAGATGCTAGATT 77695 | ||| | |||| || ||| ||| | || || ||| || || || || | ||| Sbjct 23388 TTGCAAACTGAAAT--TCTTTCTGATACACAAATTTTGACAATGCGATGGAAGCCAAATT 23445 Query 77696 ACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACA 77755 || ||||| || || || | || | || | || || || || ||||| || | Sbjct 23446 GCATACTGCCACTTCTTTGGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTGCTTGA 23505 Query 77756 TTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAAT 77815 | || || || ||||| || || ||| || ||| || | ||| || ||||| || Sbjct 23506 TCGAATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAAAGCAT 23565 Query 77816 AAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTT 77875 | |||| || ||||| |||||||| || | ||| | || || || | ||| Sbjct 23566 ATACGGCGTTCCGGTCTCAATCTGACTATCCAAAATGG-----CAAACCACAATTGCTGG 23620 Query 77876 --TATCATAGATTTGTATCGC-CTCTCTCTT-----TCATATTGAGTATATAGCCGTTCA 77927 | | | || || ||| | | | || || || | ||||| | ||| Sbjct 23621 GCTTTGACAGTCTT---TCGGGCAATGTTTTGAGACTCGTACTTTTCATATAACGCATCA 23677 Query 77928 AATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAG 77987 ||||| |||||| |||| | || || || || || || | || ||| Sbjct 23678 AATTCGCTTCCCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCAT 23737 Query 77988 TCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGA 78047 || | || | || ||||||||||| ||||| || ||||| |||||| ||| | | Sbjct 23738 TCTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAACAAA 23797 Query 78048 TCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATA 78107 ||||| | || ||| ||||||||| |||||| || || |||||||| | ||| Sbjct 23798 TCTCGAGCTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATA 23857 Query 78108 TCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGA 78167 || | |||||| || |||||||| ||||| | | || || || ||| || ||| Sbjct 23858 TCCGCATGCCAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCACCTTGA 23917 Query 78168 TCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTT 78227 || | |||| || |||| ||| | || | | |||||||| ||| || || || || Sbjct 23918 TCAACGTATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTT 23977 Query 78228 CCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATT 78287 ||||| || || ||||||||| | | ||||||||| ||| | || || Sbjct 23978 CCATTCGTCCCGCGAATATAACTGTTGGTGGAGCGAATATTGGAAATACTGACGCCAATA 24037 Query 78288 CCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATA 78347 || || ||| ||| || || || || |||||| || ||||| || || || ||| Sbjct 24038 CCGCCAGCCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATA 24097 Query 78348 CTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 78407 ||||| |||| | |||||||| || | |||| | || ||||| ||| Sbjct 24098 GAATCATCTTGCATGGATAATAGAAAACACGACGATAATTGAGGTCGAGGCGTTCCCGCA 24157 Query 78408 TTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 78467 || || | ||||||| |||||||||||| | |||| || | | | || ||||| Sbjct 24158 TTGAAAAGCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCC 24217 Query 78468 ATAGCTG-ATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTG 78526 | | | | || | | || | ||| || || || || || || ||||| | |||||| || Sbjct 24218 AAAACGGCATCCAAATTCTCTTTG-TGTATGCCGACAGCCACTCGCATTATCATATGTTG 24276 Query 78527 AGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAA 78586 || | |||| | || ||| | ||||| || ||||| |||| ||||||||| Sbjct 24277 TGGGCGTTCACACACTTTTCCATTCACACGCAACAGATACGATTTCTCCAGAGTTTTAAA 24336 Query 78587 ACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTT 78646 |||||||||| ||| ||||||||| || ||||| | ||||| || ||||| Sbjct 24337 GCCAAAATAGTCGTAATCAAAGTCTCTATCACCGATAATGGCGGAATTGAGAGCTTCTTT 24396 Query 78647 GTATTTGGTAACAATATCCATG-ACAGTAGTTG--AAATAATAGGAGATCGTACACCATT 78703 || | ||||||| || ||| ||| | |||| | |||| |||| |||| | Sbjct 24397 GTTCTCCATAACAAT-TCGATGCACA-TCGTTGGCGATTAAT-GGAGCGGGTACTTTGGT 24453 Query 78704 --TTTAG-GATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGT 78760 ||| | | ||| | || |||||| || || ||||| || | ||| ||||| Sbjct 24454 GGTTTCGTGCTTATTTTCGTAAAATAA---TTGAATGTTTTCACTGAAGACTTTGTTTGT 24510 Query 78761 TTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTG 78820 | || |||| ||| || | ||| |||| ||||| | | | |||| |||||||| Sbjct 24511 ATTTTTATGTAAATTGGAAATAGCAATTCGAGCAGCCAATTTGGAGAAATCGGGATGTTG 24570 Query 78821 TGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCC 78880 ||| | || ||||| ||||||| || || || || || || ||||| || Sbjct 24571 TGTGCTGCAGTAAGCTGCGGTTTCTGCTGCCAATTCGTCCAATTCCGATGTGGTGACGCC 24630 Query 78881 ATTATATAGTCCTTGAATAACTTTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTT 78940 ||| | || ||| |||||| | |||| ||| ||||| || | || ||||| Sbjct 24631 CGGATACACGCCAGCAATCACTTTCTGAGATATTTGGACGGGATCAACGTATTCTGTGTT 24690 Query 78941 CAATCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAATATAACATTCTCCTT 79000 || || || | |||| | || || | |||||||| || ||| | || || || Sbjct 24691 TAAGTTGTAGCAGAGTTTTGTGATTCGCGCAGTGATTTTGTCGAATTTGACGACTTCTTT 24750 Query 79001 GCATCCATTTCGTTTAATAACGAACATCGTTTGG 79034 | ||| | ||||| || || |||| ||||| Sbjct 24751 TCGTCCGTCACGTTTGATGACATACAT--TTTGG 24782 >seq835 Length=76541 Score = 282 bits (312), Expect = 6e-71 Identities = 621/910 (68%), Gaps = 23/910 (3%) Strand=Plus/Plus Query 47855 ATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCAT 47914 |||||| || || |||||||| ||||| || ||||| |||| || ||||| | ||||| Sbjct 29505 ATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGATATCATATCCAT 29564 Query 47915 AAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTC-TGAAATCAGTC 47973 | ||||| |||||| || | ||| | || | | || | | | || || || || Sbjct 29565 CCAGTCAAAGGGATTAGAAGCTTGATATAACTTGCTGACGCCAAGTGCATGTAA-CAATC 29623 Query 47974 TATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAA 48033 ||| || || || || || ||| ||||| |||||||||| || || | | Sbjct 29624 GATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGA 29683 Query 48034 CTGGTAGAGCCTC-CGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCG-A 48091 |||| || | || |||| ||| ||||||||||| | || || || || || | | Sbjct 29684 CTGGAAGTGAATCTCGTAC-AAATTCTTGTTCGATGATAACGGCGTCGGAAATGATTGCA 29742 Query 48092 TGT-TACCGTTTCCTCACTTGGTGGATACA-ACAAATGTTTAA-ACATTAAACATGCAAA 48148 || || | ||| || | | || || | | | | |||| | ||||||||| Sbjct 29743 TGAATAGAG---CCTT-CTGGAAGCTTATTTACCAGTTTCGAGTACATCAGACATGCAAA 29798 Query 48149 ATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCAT 48208 |||||||| || |||||||| | ||| || | || || ||||| || || ||||| Sbjct 29799 GTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCAT 29858 Query 48209 TAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 48268 | ||| ||||| || ||||||||||| | ||| ||||| || || || || ||||| Sbjct 29859 CAATCCTCGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTC 29918 Query 48269 TACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTATC-CACCGTT 48327 ||||||||||| || | ||| ||| | | ||| | || || ||| |||| || Sbjct 29919 GACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTT-TGGATCGCACCATT 29977 Query 48328 GT---GCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAA 48384 ||||| | || || || | || || || |||||||| || || | || || Sbjct 29978 TCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGC-ACAGTAAA 30036 Query 48385 AGtt-tttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAG 48443 | | ||||||| | |||||| | ||| ||||| || || | ||||| ||| ||| Sbjct 30037 TGCTGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAG 30096 Query 48444 TGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACC 48503 || |||||||| ||||| || |||||||||||||| |||| ||||| | |||||| ||| Sbjct 30097 TGTATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGAACC 30156 Query 48504 TCCGTACAAAATCGTTCA--GCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAA 48561 || | | || |||| || | ||| ||||| || ||||||||||| || ||||| | Sbjct 30157 TCACTGCTGAAA--TTCATGGCGAGATTTTCATTGACAATTCCATCACTGGCTGCAAAGA 30214 Query 48562 ATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGA 48621 | || || || ||||| ||||| | | |||| ||| | | ||| ||||||||| | Sbjct 30215 AGGCCAACACGTGTTTGATAAAGTGTCTTTCATTGTCCGATATATTAAGCCAGTCATTCA 30274 Query 48622 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACA 48681 | || | | ||| | |||||| || |||||||| |||||||||||| ||||||| Sbjct 30275 TGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTTATACA 30334 Query 48682 TATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTGGATTTTTTGCAA 48741 | | ||| || ||| | ||| || || || | ||||| | || ||||||| | || Sbjct 30335 TGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGGTTCGGATTTTCTCGAA 30394 Query 48742 GGATAGGTTC 48751 | | |||||| Sbjct 30395 GAAAAGGTTC 30404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694562776174400