Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq378 190 4e-43 seq2154 168 1e-36 seq7469 152 1e-31 seq3863 122 2e-22 seq7101 114 3e-20 seq469 98.7 2e-15 seq6259 84.2 5e-11 >seq378 Length=86116 Score = 190 bits (210), Expect = 4e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| || ||||| |||||| ||||||||||| || ||| Sbjct 293 CCACCACGAAGACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCGCA 234 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| || || || ||||||||||| ||||| ||||||| |||||| || ||| ||| Sbjct 233 AGCGTTCGTCCGTCTTCTAGTTGTTTACCGGCGAAGATCAGACGTTGCTGATCAGGAGGA 174 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| |||||||| || || ||| | || |||||||| || | |||||| Sbjct 173 ATTCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATAGTGTCTGATGACTCGACT 114 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || | ||| || || || || ||||| || || || |||||||||||| Sbjct 113 TCCAAAGTTATAGTTTTTCCAGTCAAGGTTTTCACAAATATCTGCATT 66 Score = 179 bits (198), Expect = 8e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || |||||||||||||| | ||| ||||| || |||||||| || || Sbjct 522 ACCACCACGAAGACGAAGTACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGC 463 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||| || || || |||||||| |||||||| || | |||||| ||||| || Sbjct 462 AAGCGTGCGTCCGTCTTCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGG 403 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || || ||||| |||||||| || || || | |||||||| || |||| ||| || Sbjct 402 AATTCCTTCTTTGTCCTGGATCTTCGCCTTCACATTGTCGATAGTATCTGAAGATTCCAC 343 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||| | || || || || || |||| |||||||| || || |||||| Sbjct 342 TTCCAACGTAATAGTTTTCCCAGTCAGCGTCTTAACAAAAATTTGCATT 294 >seq2154 Length=27549 Score = 168 bits (186), Expect = 1e-36 Identities = 152/191 (80%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969 |||||||||||||||| || || ||||| ||||| ||||| | |||||| || || || | Sbjct 4273 CTTTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAA 4214 Query 282970 TCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTAT 283029 ||||||| |||||||| ||||| || ||||||||||| ||||| || || || ||| Sbjct 4213 TCAAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTAT 4154 Query 283030 CGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 |||| ||||| || | |||||| || |||||||| || || || || | ||||| |||| Sbjct 4153 CGATCGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTCTTGACGA 4094 Query 283090 ATATCTGCATT 283100 | ||||||||| Sbjct 4093 AAATCTGCATT 4083 >seq7469 Length=86738 Score = 152 bits (168), Expect = 1e-31 Identities = 689/1065 (65%), Gaps = 53/1065 (5%) Strand=Plus/Minus Query 316154 CAAGTGATTCTTTGTCTTCACCGGAAGCATAACGCCATTGGATGTACTGATTGGGCGTCA 316213 ||||| |||| |||||||| ||||| | | | ||| || || || ||||| | |||| Sbjct 63029 CAAGTAATTCCTTGTCTTCTCCGGATTGAAATCTCCACTGAATATATTGATTTGCAGTCA 62970 Query 316214 TGTCAAGATGATCCTCGATGTGGTGGAAAGCGTGCTGTGCCACGTAAGCAAGACGCATAT 316273 || ||||| | |||||||| ||||| |||| |||||| || || |||| || | Sbjct 62969 GATCGAGATGTGCTTCGATGTGATGGAATGCGTTCTGTGCAACATAGGCAAATCGTAAGC 62910 Query 316274 TTGGATGCTTCCAAACGCTACCGTTAGTAGTTTCCATCTGCCCTGTTAGCACTTTAATGA 316333 ||||||| ||||| || | || | |||| |||| | || || |||| || || | Sbjct 62909 TTGGATGTTTCCACACAGTTCCACTCGTAGGCTCCACTTCACCAGTCAGCATCTTGATCA 62850 Query 316334 GAGTACTTTTTCCCGCGCCGTTTTCACCCACGACACCGATCCTGGAGTTGAGC-GATACC 316392 ||| |||||| || || ||| |||| ||| |||| | || |||| | || Sbjct 62849 AGGTAGATTTTCCTGCTCCATTTGGTCCCAACACAGCGATTC--GACTTGACAAGGCACA 62792 Query 316393 TGGG-CATTCACGTTGTCGA-AGACCAGTTTGTC-CGTCCCAGGATACTTGAA--ACCCA 316447 | | || | || || |||| ||||||| ||||| |||||| || | | | | Sbjct 62791 AGTGACAGAGATATTACTGATAGACG-GTTTGTCTCGTCC-AGGATAAGTGTATGAGCAA 62734 Query 316448 CCCCGC-GAAGCTTCATGATGGC--ACGGTCCTTCGAAGTGATACCCTCGAGAAAGCCGG 316504 | | || | | || ||| || | ||| ||||| | | ||||| || | Sbjct 62733 TTCGTCAGACGGATAAT--TGGTTTACCCTTGTTCT---TGATATCTGCAAGAAAACCCG 62679 Query 316505 GTTCGGGGAATTTCCAC--GTAGTCTTCGTCTCGGCGAGCGTGTAGTAACTTGCAGATTC 316562 |||| || || || | | | | || || | | |||||||||| | || Sbjct 62678 GTTCAGGAAACTTGAAGTGGAATAATGCGGCTT--CCAATTCGTAGTAACTTCTGGCCTC 62621 Query 316563 GGGACGCTTC---TTCACGAATTCGGACAGATTTCCTTTATACTTCTTCAGCTTCAGGTT 316619 || |||| || || || || |||| ||| ||||| ||| |||| ||||| | Sbjct 62620 AGG---CTTCACTTTGACAAACTCTGACAAATTACCTTTGTACGTCTTGAGCTTGCGT-- 62566 Query 316620 GGGTTCGTAATGGATGATAGAAGTACAGACAGCATCGAGGAAACCAGAATCGTGTGATAC 316679 | |||||| || | || ||||| ||| ||| | ||| |||| ||||| ||||| Sbjct 62565 -GCTTCGTAGTGAACAATGTTCGTACAAACATGATCCAAGAATCCAGGGTCGTGGGATAC 62507 Query 316680 AATCACACATGAAACGCCTTTTAGGTTGACCAGATAGTCGATCAGCCAGCTCACATTCGA 316739 ||||| || | |||| || ||| || ||||| ||||||| |||||| Sbjct 62506 AATCATACTGGTAACGTTGGGTAAATTGTTCAAATAGTTTTCCAGCCAGGCGACATTCTT 62447 Query 316740 CACAGAAAGATGGTTGGTCGGTTCGTCAAGTAGTAGTAGCTTCGCGTCCAACAGCATAGC 316799 ||| |||||||| || ||||| ||||| || || | | || | || || ||| || Sbjct 62446 TACATCGAGATGGTTCGTAGGTTCATCAAGAAGCAGAACATCAGCTTGCATCAACATGGC 62387 Query 316800 GCGTGCGAGAGCAAGCTTCATTTTCCACCCCCCGGAAAGAGTGTTAATCGGGGCAGATTG 316859 || ||||| | |||||||||||||| || || || | || | ||| | ||| Sbjct 62386 ACGAGCGAGTTCTAGCTTCATTTTCCATCCACCCGATAAAGATGAGACCGGTAAATGTTG 62327 Query 316860 GCGCTCAACATCAAAGCCAACTGATTCGAGAGTAGACACGATTTTTTCACGAGAC--CAT 316917 ||| || || || || | || || || || | || ||| || ||| Sbjct 62326 CATTTCATCAGTGAACCCGAC-GCTT---GA-TAAAC-------TATCGCGA-ACTTCAT 62280 Query 316918 ---GTGTT--TTCTTTAACTTGGTCGTCATTGGCAATGAAGTCAACGATAGACGTGTTAG 316972 ||| | |||||| | | || ||| ||||| || | || || | | Sbjct 62279 CTCGTGGTACTTCTTTCAACTCTTCATCACAAAACATGAATTCTATGACAGGAAGCATCG 62220 Query 316973 ATTCGGATCCGTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGA 317032 ||| || | | | | ||| || ||| | |||| || || ||| || | ||| | Sbjct 62219 CTTCAGAAGCCTGCAAATTATGTTCGACAAACACAGTCTTTAGCTCATCTTTAGACGGAA 62160 Query 317033 ACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA-CCATTG 317091 | ||||||| || ||||| | || || |||||||| || || || || ||| ||||| Sbjct 62159 ATCCTTCCAGTTGGCCGTTAGCGATGGCTCTCATCAGCGTTGATTTACC-GCATCCATTT 62101 Query 317092 GGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGA 317151 || || || |||||||| |||| ||| |||||| | || |||| ||||||||| ||| Sbjct 62100 GGACCACAGAGACCATAACGATGTCCTCTCTTCAAACGCAACCGGGCGTTGTTCAGTAGA 62041 Query 317152 ATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCC 317196 ||| |||||||||| |||| |||||||||||||| ||| || ||| Sbjct 62040 ATCATACCACCATACGCCAAAGAGAACTCACAATTACATAGATCC 61996 >seq3863 Length=215 Score = 122 bits (134), Expect = 2e-22 Identities = 117/150 (78%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 |||||||| || || ||||||| |||||| || ||| ||||| || |||||||| ||| Sbjct 1 AGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGG 60 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| || || ||| | || ||||||||||| | |||||||| | ||| || || || Sbjct 61 ATCTTCGCCTTCACGTTGTCAATAGTGTCCGATGACTCGACTTCCAAAGTTATGGTTTTC 120 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || |||| |||||||| || || |||||| Sbjct 121 CCAGTCAGCGTCTTAACAAAAATTTGCATT 150 >seq7101 Length=52731 Score = 114 bits (126), Expect = 3e-20 Identities = 101/126 (80%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| | || || ||||||||||||||||||||||| ||||||||||| || || Sbjct 35532 ACCACCACGTAATCGTAGAACCAGATGTAACGTGCTTTCTTTCTGGATGTTGTAATCCGC 35591 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || || ||||| || | ||||||||| ||||| || | ||| |||||||| || Sbjct 35592 TAATGTTCGACCATCTTCCAATTGTTTCCCAGCAAAAATGAGACGCTGTTGGTCCGGGGG 35651 Query 282992 AATACC 282997 |||||| Sbjct 35652 AATACC 35657 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| ||||||||||| |||||||| || || ||||||| || || | | || || Sbjct 35708 ATACCTTCCTTGTCTTGAATCTTTGCCTTCACATTATCGATCGTATCAGCCGACTCCACG 35767 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||||||||| || || |||||||| || || |||||||| Sbjct 35768 TCCAATGTGATCGTCTTCCCGGTTAAAGTCTTGACAAAAATCTGCAT 35814 >seq469 Length=169936 Score = 98.7 bits (108), Expect = 2e-15 Identities = 108/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || || || |||||||| |||||||| || | ||||||||||||| ||| Sbjct 159208 AGAGTACGACCGTCTTCAAGTTGTTTTCCGGCAAAAATTAGACGTTGTTGGTCAGGAGGA 159149 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||||||||| ||| ||||| || || | || || ||||||| | ||| || Sbjct 159148 ATTCCTTCCTTGTCTTGAATC-TTGCTCTTGACATTGTCAATCGTGTCCGCTGATTCTAC 159090 Query 283052 TTCGAGAGTGATCGTCTTACC 283072 |||||| || || || || || Sbjct 159089 TTCGAGTGTAATTGTTTTTCC 159069 >seq6259 Length=113 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGT 282956 || ||||| |||||| ||||||||||| || ||||| || || || || ||||||||| Sbjct 104 TGCAACGTTGATTCTTTCTGGATGTTGTAATCCGCAAGAGTACGTCCGTCTTCTAGTTGT 45 Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTC 283000 || || || ||||||| |||||| || ||| ||||| || || Sbjct 44 TTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046575447465340