Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1503 233 2e-56 >seq1503 Length=45688 Score = 233 bits (258), Expect = 2e-56 Identities = 583/873 (67%), Gaps = 22/873 (3%) Strand=Plus/Plus Query 16679 TAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATG 16738 || || | ||||||||| || |||||||| ||||| || | ||||| || | ||||| Sbjct 34008 TATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATATCCATC 34067 Query 16739 AAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTA 16798 | ||||| ||||||| ||| | ||| || | || ||| | | |||| | Sbjct 34068 CAGTCAAAGGGATTAGAAGCGTGATATAACTTGCTGACGCCAAGTGCATGTAACAATCGA 34127 Query 16799 TCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACC 16858 ||||| ||||| || || ||||| | ||| || | |||||||| || || || Sbjct 34128 TCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGACT 34187 Query 16859 GGAAGAGCTTC-CGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 ||||| | || ||| ||| || ||| || || | ||| || || ||| || | Sbjct 34188 GGAAGTGAATCTCGTACAAATTC-TTGTTCGATGATAACGGCGTCGGAAATGATTGCATG 34246 Query 16918 AACTCGTTCCTC--GGACGGTGTATGTTTAAGATGTTTAA--ACATCAGACATGCGAAAT 16973 || | | ||| ||| | | | |||| | || | ||||||||||||| || | Sbjct 34247 AA-TAGAGCCTTCTGGAAGCT---TATTTACCAGTTTCGAGTACATCAGACATGCAAAGT 34302 Query 16974 CGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCT 17033 | ||||||| ||| || || | ||||| || || || ||||| | || |||||| Sbjct 34303 CACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCA 34362 Query 17034 TTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGA 17093 |||||||||||| | ||||||||| | | ||| || || || || || || || |||| Sbjct 34363 ATCCTCGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTCGA 34422 Query 17094 CGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGT-CTTTGTTACGAATCCATTTC 17152 ||| ||||| || | | || ||| || ||| || | ||||| || | ||||||| Sbjct 34423 CGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCA-CCATTTC 34481 Query 17153 TGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTC 17212 | |||| | ||||| | | | ||| || ||||| || || | ||| | | Sbjct 34482 AACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCACAGTAAATGC 34541 Query 17213 TCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGT 17272 | |||||| | | || | || || ||||| || | || |||| ||| |||||| Sbjct 34542 TGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGTGT 34601 Query 17273 ATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 || || || || || || |||||||||||||||||||| ||||| | || ||||| || Sbjct 34602 ATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGAACCTCA 34661 Query 17333 ACGTAGAA--TCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACG 17390 | ||| || | || |||||||| || || || || || || || || || || | Sbjct 34662 CTGCTGAAATTCAT--GGCGAGATTTTCATTGACAATTCCATCACTGGCTGCAAAGAAGG 34719 Query 17391 CCAATATATGCTTAATGAAATATTTTTC---GTCCGGTGTAAGAACGCGCCAGTCCTTTA 17447 |||| | || || || || | | |||| ||||| | || || ||||||| || | Sbjct 34720 CCAACACGTGTTTGATAAAGTGTCTTTCATTGTCCGATATATTAA---GCCAGTCATTCA 34776 Query 17448 AATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACA 17507 || | | ||| | |||||| | ||||||||| || ||| |||| || ||||||| Sbjct 34777 TGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTTATACA 34836 Query 17508 TATTCCAAATATCATTGTATTGTATGGGGAATA 17540 | | |||||| ||| | |||||| || |||| Sbjct 34837 TGTCCCAAATCTCAGATTGTTGTATCGGAAATA 34869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517508181453120