Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq650 143 2e-29 >seq650 Length=49279 Score = 143 bits (158), Expect = 2e-29 Identities = 208/294 (71%), Gaps = 0/294 (0%) Strand=Plus/Minus Query 18893 TGTTATAGATACAATTAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAA 18952 ||| ||| | | | | ||||| ||| | | | ||||| || || |||| ||||||| Sbjct 30573 TGTGATACACAAACTCAAAACTGACCAAAATTGTCGACGTATCATCTTATCCGCTTGGAA 30514 Query 18953 TCCAAAGGATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGT 19012 ||||| ||| | || ||||| | ||||||| ||||| | | || || |||||||| Sbjct 30513 TCCAACCGATTTAGCCGAAATGGCATTACCTCCCTGTCATCTGATGTGCCAATTTTACGT 30454 Query 19013 TGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGT 19072 |||||| || |||||||| |||||| | |||||| |||| | ||||| || || || || Sbjct 30453 TGCAAATGGGGAATTATCATGCCAAATGTACCAGCGATCCGCTGATATTGGTCTGGGCGT 30394 Query 19073 ACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACT 19132 || || || |||||| | || || ||| | || | || | || || || || | || Sbjct 30393 TCCATTTAATATTGCTAGCTACGCGCTTTTGACAAAAATGATTGCACACGTGACTGATCT 30334 Query 19133 TAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCA 19186 || |||| || || ||||| || || ||||| ||||| ||| ||||||| Sbjct 30333 CCAACCCGGCGAGTTTGTTCATGTGATCGGAGATGCCCATATCTACATGAATCA 30280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399475837964280