Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq650 105 5e-18 >seq650 Length=49279 Score = 105 bits (116), Expect = 5e-18 Identities = 190/275 (69%), Gaps = 6/275 (2%) Strand=Plus/Plus Query 101638 AAGTGTTGGAAACGGTCTAGGAGTTCGCGTCAACT---GCATTTTAAGAGCATCAATGTG 101694 ||||||||||||||| | ||||| || |||| | || | | || | || | ||| Sbjct 30225 AAGTGTTGGAAACGGGCGTGGAGTGCGT-TCAAGTTGTGCCTGT--AGCGGTTCCAAGTG 30281 Query 101695 ATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGT 101754 || | ||||| || |||||||| || ||| | |||||| || || |||| ||| Sbjct 30282 ATTCATGTAGATATGGGCATCTCCGATCACATGAACAAACTCGCCGGGTTGGAGATCAGT 30341 Query 101755 GACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAA 101814 || || |||||||| || ||||| | ||||||||||| |||||||| || || | Sbjct 30342 CACGTGTGCAATCATTTTTGTCAAAAGCGCGTAGCTAGCAATATTAAATGGAACGCCCAG 30401 Query 101815 CCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAA 101874 || |||||||| |||| || |||| ||| || || | | |||| || ||||| Sbjct 30402 ACCAATATCAGCGGATCGCTGGTACATTTGGCATGATAATTCCCCATTTGCAACGTAAAA 30461 Query 101875 TTGACTTAATACATGACAAGGCGGCAACACCATTT 101909 ||| | | | |||||| || || || |||||| Sbjct 30462 TTGGCACATCAGATGACAGGGAGGTAATGCCATTT 30496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361225734499784