Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq650 87.8 1e-12 >seq650 Length=49279 Score = 87.8 bits (96), Expect = 1e-12 Identities = 184/272 (68%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 97003 AGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTC-TGTGAGAGCATCAATGTGATT 97061 |||||||| || || | ||||| || ||| || | ||| || | || | |||||| Sbjct 30226 AGTGTTGGAAACGGGCGTGGAGTGCGTTCAAGTTGTGCCTGT-AGCGGTTCCAAGTGATT 30284 Query 97062 CACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGAC 97121 || || || || |||||||| | |||| ||| || || || | |||||| || Sbjct 30285 CATGTAGATATGGGCATCTCCGATCACATGAACAAACTCGCCGGGTTGGAGATCAGTCAC 30344 Query 97122 ATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCC 97181 || || ||||| || || || | ||||||||||| ||||| || || || || || Sbjct 30345 GTGTGCAATCATTTTTGTCAAAAGCGCGTAGCTAGCAATATTAAATGGAACGCCCAGACC 30404 Query 97182 CATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTG 97241 |||||||| |||| || || | || || || | | |||| || ||||| || Sbjct 30405 AATATCAGCGGATCGCTGGTACATTTGGCATGATAATTCCCCATTTGCAACGTAAAATTG 30464 Query 97242 ACTCAATACATGACAGGGGGGCAACGCCATTT 97273 | || | ||||||||| || || ||||||| Sbjct 30465 GCACATCAGATGACAGGGAGGTAATGCCATTT 30496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346759554328880