Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq3752 82.4 9e-11 >seq3752 Length=66593 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| |||| |||||||||||||| | ||||| |||||| Sbjct 38948 CTCCCCGACCGGGAATTGAACCCGGGTCCCCCGCGTGACAGGCAGGTATACTAGCCACTA 38889 Query 60126 TACTACCGAGGATTG 60140 ||||| ||||||||| Sbjct 38888 TACTATCGAGGATTG 38874 Score = 82.4 bits (90), Expect = 9e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| |||| |||||||||||||| | ||||| |||||| Sbjct 41154 CTCCCCGACCGGGAATTGAACCCGGGTCCCCCGCGTGACAGGCAGGTATACTAGCCACTA 41213 Query 60126 TACTACCGAGGATTGAATAT 60145 ||||| |||||||| |||| Sbjct 41214 TACTATCGAGGATTTGATAT 41233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571776257587520